RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CCND3P30281 292 aaPredicted RBP18.77■□□□□ 0.6
RAB5C-205ENST00000550013 RGS2P41220 211 aa18.77■□□□□ 0.6
RAB5C-205ENST00000550013 RAB3GAP1Q15042 981 aa18.77■□□□□ 0.6
RAB5C-205ENST00000550013 AACSQ86V21 672 aa18.77■□□□□ 0.6
RAB5C-205ENST00000550013 TRMT44Q8IYL2 757 aaKnown RBP18.77■□□□□ 0.6
RAB5C-205ENST00000550013 EHD4Q9H223 541 aa18.77■□□□□ 0.6
RAB5C-205ENST00000550013 USP17L15C9J2P7 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L13C9JLJ4 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L11C9JVI0 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L18D6R9N7 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L22D6RA61 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L17D6RBQ6 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L19D6RCP7 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L20D6RJB6 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 BMP8BP34820 402 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
RAB5C-205ENST00000550013 USP17L24Q0WX57 530 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 MAP3K12Q12852 859 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 ABCB5Q2M3G0 1257 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 CERKLQ49MI3 558 aaPredicted RBP18.76■□□□□ 0.59
RAB5C-205ENST00000550013 CERS3Q8IU89 383 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 APBA2Q99767 749 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 RABGAP1Q9Y3P9 1069 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 DNAH12Q6ZR08 3092 aa18.76■□□□□ 0.59
RAB5C-205ENST00000550013 SHMT1P34896 483 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 MAGEA10P43363 369 aaPredicted RBP18.75■□□□□ 0.59
RAB5C-205ENST00000550013 PLCD1P51178 756 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 LHX8Q68G74 356 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 CATSPERGQ6ZRH7 1159 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 TTC6Q86TZ1 520 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 RIOK1Q9BRS2 568 aaKnown RBP18.75■□□□□ 0.59
RAB5C-205ENST00000550013 KIAA1683Q9H0B3 1180 aa18.75■□□□□ 0.59
RAB5C-205ENST00000550013 CWC22Q9HCG8 908 aaKnown RBP18.75■□□□□ 0.59
RAB5C-205ENST00000550013 COL6A1P12109 1028 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 VCAM1P19320 739 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 GUCY1A2P33402 732 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 USP14P54578 494 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 EVX2Q03828 476 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 MAP2K5Q13163 448 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 WDR78Q5VTH9 848 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 IL1RAPL2Q9NP60 686 aa18.74■□□□□ 0.59
RAB5C-205ENST00000550013 ERC1Q8IUD2 1116 aa18.73■□□□□ 0.59
RAB5C-205ENST00000550013 EDC3Q96F86 508 aaKnown RBP18.73■□□□□ 0.59
RAB5C-205ENST00000550013 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
RAB5C-205ENST00000550013 FLRT1Q9NZU1 646 aa18.73■□□□□ 0.59
RAB5C-205ENST00000550013 BTBD7Q9P203 1132 aa18.73■□□□□ 0.59
RAB5C-205ENST00000550013 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
RAB5C-205ENST00000550013 POLR3DP05423 398 aaPredicted RBP18.72■□□□□ 0.59
RAB5C-205ENST00000550013 CCNA1P78396 465 aa18.72■□□□□ 0.59
RAB5C-205ENST00000550013 SEPT2Q15019 361 aa18.72■□□□□ 0.59
RAB5C-205ENST00000550013 LRRC26Q2I0M4 334 aa18.72■□□□□ 0.59
RAB5C-205ENST00000550013 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
RAB5C-205ENST00000550013 SLC15A5A6NIM6 579 aa18.71■□□□□ 0.59
RAB5C-205ENST00000550013 SPDYE16A6NNV3 312 aaPredicted RBP18.71■□□□□ 0.59
RAB5C-205ENST00000550013 GLRX3O76003 335 aaKnown RBP18.71■□□□□ 0.59
RAB5C-205ENST00000550013 PDE6AP16499 860 aa18.71■□□□□ 0.59
RAB5C-205ENST00000550013 PTPREP23469 700 aa18.71■□□□□ 0.59
RAB5C-205ENST00000550013 GABPAQ06546 454 aa18.71■□□□□ 0.59
RAB5C-205ENST00000550013 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
RAB5C-205ENST00000550013 LBX2Q6XYB7 198 aa18.71■□□□□ 0.59
RAB5C-205ENST00000550013 APBB1O00213 710 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 SLC9C2Q5TAH2 1124 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 MFSD14CQ5VZR4 134 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 NPLOC4Q8TAT6 608 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 RHPN1Q8TCX5 695 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
RAB5C-205ENST00000550013 MYH8P13535 1937 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 RLFQ13129 1914 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 A0A0C4DFX4 3053 aa18.7■□□□□ 0.58
RAB5C-205ENST00000550013 A0A1W2PRG0 241 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 CYP2D6P10635 497 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 GRB14Q14449 540 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
RAB5C-205ENST00000550013 TDHQ8IZJ6 230 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 SLC17A8Q8NDX2 589 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
RAB5C-205ENST00000550013 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
RAB5C-205ENST00000550013 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 IVNS1ABPQ9Y6Y0 642 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 ZNF532Q9HCE3 1301 aa18.69■□□□□ 0.58
RAB5C-205ENST00000550013 BAZ2AQ9UIF9 1905 aaKnown RBP18.68■□□□□ 0.58
RAB5C-205ENST00000550013 TCRBV5S4A2TA0A5A2 114 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 GOLIM4O00461 696 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 MPHOSPH10O00566 681 aaKnown RBP18.68■□□□□ 0.58
RAB5C-205ENST00000550013 ATP2B2Q01814 1243 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 Q7L0L9 218 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 SLC44A5Q8NCS7 719 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 SDR42E1Q8WUS8 393 aa18.68■□□□□ 0.58
RAB5C-205ENST00000550013 A0A0G2JMZ2 1700 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 HOXC6P09630 235 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 CNGA1P29973 690 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 CYP2C19P33261 490 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 LRIT3Q3SXY7 679 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 MIER1Q8N108 512 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 DEFB123Q8N688 67 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms