RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
TROAP-211ENST00000549891 USP6NLQ92738 828 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 GDF15Q99988 308 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 PORCNQ9H237 461 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
TROAP-211ENST00000549891 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.23
TROAP-211ENST00000549891 LAMA3Q16787 3333 aa16.51■□□□□ 0.23
TROAP-211ENST00000549891 PEX10O60683 326 aa16.51■□□□□ 0.23
TROAP-211ENST00000549891 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
TROAP-211ENST00000549891 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
TROAP-211ENST00000549891 ZYXQ15942 572 aaKnown RBP16.51■□□□□ 0.23
TROAP-211ENST00000549891 ABCB5Q2M3G0 1257 aa16.51■□□□□ 0.23
TROAP-211ENST00000549891 MORN1Q5T089 497 aa16.51■□□□□ 0.23
TROAP-211ENST00000549891 ZMYND8Q9ULU4 1186 aaPredicted RBP16.51■□□□□ 0.23
TROAP-211ENST00000549891 MYH8P13535 1937 aa16.51■□□□□ 0.23
TROAP-211ENST00000549891 MAP2K5Q13163 448 aa16.5■□□□□ 0.23
TROAP-211ENST00000549891 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
TROAP-211ENST00000549891 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
TROAP-211ENST00000549891 GPR153Q6NV75 609 aa16.5■□□□□ 0.23
TROAP-211ENST00000549891 KIAA1683Q9H0B3 1180 aa16.5■□□□□ 0.23
TROAP-211ENST00000549891 SOX1O00570 391 aaPredicted RBP16.49■□□□□ 0.23
TROAP-211ENST00000549891 VCAM1P19320 739 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 MFSD14CQ5VZR4 134 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 LBX2Q6XYB7 198 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 CATSPERGQ6ZRH7 1159 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 AACSQ86V21 672 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
TROAP-211ENST00000549891 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
TROAP-211ENST00000549891 PFASO15067 1338 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 MAGEB6P1A0A0J9YX57 407 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 SLC15A5A6NIM6 579 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
TROAP-211ENST00000549891 RLBP1P12271 317 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 SYN1P17600 705 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
TROAP-211ENST00000549891 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
TROAP-211ENST00000549891 CCL14Q16627 93 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 WDR78Q5VTH9 848 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
TROAP-211ENST00000549891 MSCO60682 206 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 COL6A1P12109 1028 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 MAGEA10P43363 369 aaPredicted RBP16.47■□□□□ 0.23
TROAP-211ENST00000549891 LRIT3Q3SXY7 679 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 LHX8Q68G74 356 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 POTEEQ6S8J3 1075 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 TDHQ8IZJ6 230 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 SLC17A8Q8NDX2 589 aa16.47■□□□□ 0.23
TROAP-211ENST00000549891 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
TROAP-211ENST00000549891 CNMDO75829 334 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 PTPREP23469 700 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 SHMT1P34896 483 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 PLCD1P51178 756 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 SLC9C2Q5TAH2 1124 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
TROAP-211ENST00000549891 RIOK1Q9BRS2 568 aaKnown RBP16.46■□□□□ 0.23
TROAP-211ENST00000549891 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
TROAP-211ENST00000549891 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
TROAP-211ENST00000549891 COL6A3P12111 3177 aa16.46■□□□□ 0.22
TROAP-211ENST00000549891 HOXC6P09630 235 aa16.45■□□□□ 0.22
TROAP-211ENST00000549891 MS4A1P11836 297 aa16.45■□□□□ 0.22
TROAP-211ENST00000549891 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
TROAP-211ENST00000549891 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
TROAP-211ENST00000549891 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
TROAP-211ENST00000549891 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
TROAP-211ENST00000549891 DNAH12Q6ZR08 3092 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 SPDYE16A6NNV3 312 aaPredicted RBP16.44■□□□□ 0.22
TROAP-211ENST00000549891 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
TROAP-211ENST00000549891 PDE6AP16499 860 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 GABPAQ06546 454 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 GRB14Q14449 540 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
TROAP-211ENST00000549891 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 HOXC10Q9NYD6 342 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 BTBD7Q9P203 1132 aa16.44■□□□□ 0.22
TROAP-211ENST00000549891 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
TROAP-211ENST00000549891 STRNO43815 780 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 CNGA1P29973 690 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 COG2Q14746 738 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 SEPT2Q15019 361 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 LRRC26Q2I0M4 334 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 LPAR1Q92633 364 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
TROAP-211ENST00000549891 HMMRO75330 724 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
TROAP-211ENST00000549891 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 DEFB123Q8N688 67 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 TANGO6Q9C0B7 1094 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 SENP6Q9GZR1 1112 aaPredicted RBP16.42■□□□□ 0.22
TROAP-211ENST00000549891 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
TROAP-211ENST00000549891 RLFQ13129 1914 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms