RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 GINM1Q9NU53 330 aa13.81□□□□□ -0.2
C1RL-209ENST00000543941 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
C1RL-209ENST00000543941 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
C1RL-209ENST00000543941 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
C1RL-209ENST00000543941 ABCB5Q2M3G0 1257 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
C1RL-209ENST00000543941 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 COA7Q96BR5 231 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 TMOD4Q9NZQ9 345 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 BTBD7Q9P203 1132 aa13.8□□□□□ -0.2
C1RL-209ENST00000543941 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 HMMRO75330 724 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 CYP2B6P20813 491 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 ERVK-24P63145 666 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
C1RL-209ENST00000543941 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
C1RL-209ENST00000543941 CCL14Q16627 93 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 MORN1Q5T089 497 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 TTC6Q86TZ1 520 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
C1RL-209ENST00000543941 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 MYH8P13535 1937 aa13.79□□□□□ -0.2
C1RL-209ENST00000543941 CEP290O15078 2479 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 MBD4O95243 580 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 POLR3DP05423 398 aaPredicted RBP13.78□□□□□ -0.2
C1RL-209ENST00000543941 VCAM1P19320 739 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 FXR1P51114 621 aaKnown RBP eCLIP13.78□□□□□ -0.2
C1RL-209ENST00000543941 MAP3K21Q5TCX8 1036 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 PAGR1Q9BTK6 254 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.78□□□□□ -0.22e-7■■■■□ 23.4
C1RL-209ENST00000543941 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
C1RL-209ENST00000543941 FARP2O94887 1054 aaPredicted RBP13.77□□□□□ -0.21
C1RL-209ENST00000543941 AKR1B1P15121 316 aa13.77□□□□□ -0.21
C1RL-209ENST00000543941 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
C1RL-209ENST00000543941 GPR142Q7Z601 462 aa13.77□□□□□ -0.21
C1RL-209ENST00000543941 CERS3Q8IU89 383 aa13.77□□□□□ -0.21
C1RL-209ENST00000543941 PAWRQ96IZ0 340 aaKnown RBP13.77□□□□□ -0.21
C1RL-209ENST00000543941 CRNKL1Q9BZJ0 848 aaKnown RBP13.77□□□□□ -0.21
C1RL-209ENST00000543941 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
C1RL-209ENST00000543941 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 SPDYE16A6NNV3 312 aaPredicted RBP13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L15C9J2P7 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L13C9JLJ4 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L11C9JVI0 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L18D6R9N7 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L22D6RA61 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L17D6RBQ6 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L19D6RCP7 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L20D6RJB6 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 IGHA2P01877 340 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
C1RL-209ENST00000543941 HMGCRP04035 888 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
C1RL-209ENST00000543941 DPF3Q92784 378 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 RPAP3Q9H6T3 665 aaPredicted RBP13.76□□□□□ -0.21
C1RL-209ENST00000543941 GREB1LQ9C091 1923 aaPredicted RBP13.76□□□□□ -0.21
C1RL-209ENST00000543941 FRMPD3Q5JV73 1810 aa13.76□□□□□ -0.21
C1RL-209ENST00000543941 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 USP17L12C9JPN9 530 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 USP17L21D6R901 530 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 CCND3P30281 292 aaPredicted RBP13.75□□□□□ -0.21
C1RL-209ENST00000543941 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
C1RL-209ENST00000543941 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 CTR9Q6PD62 1173 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 LBX2Q6XYB7 198 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 FEZ1Q99689 392 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.75□□□□□ -0.21
C1RL-209ENST00000543941 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
C1RL-209ENST00000543941 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
C1RL-209ENST00000543941 RABGAP1Q9Y3P9 1069 aa13.75□□□□□ -0.21
C1RL-209ENST00000543941 COL11A1P12107 1806 aaPredicted RBP13.75□□□□□ -0.21
C1RL-209ENST00000543941 CDK8P49336 464 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 LHX8Q68G74 356 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 NPLOC4Q8TAT6 608 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 NUDT12Q9BQG2 462 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
C1RL-209ENST00000543941 ZNFX1Q9P2E3 1918 aaKnown RBP13.74□□□□□ -0.21
C1RL-209ENST00000543941 GSG1L2A8MUP6 293 aa13.73□□□□□ -0.21
C1RL-209ENST00000543941 MPHOSPH10O00566 681 aaKnown RBP13.73□□□□□ -0.21
C1RL-209ENST00000543941 XRCC5P13010 732 aaKnown RBP13.73□□□□□ -0.21
C1RL-209ENST00000543941 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
C1RL-209ENST00000543941 MAPK4P31152 587 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms