RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ERC1Q8IUD2 1116 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 GUCD1Q96NT3 240 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 PORCNQ9H237 461 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 DHX36Q9H2U1 1008 aaKnown RBP14.46□□□□□ -0.09
GABPB1-206ENST00000543881 ZBTB40Q9NUA8 1239 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 PALD1Q9ULE6 856 aa14.46□□□□□ -0.09
GABPB1-206ENST00000543881 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 IGSF3O75054 1194 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 IDH1O75874 414 aaKnown RBP14.45□□□□□ -0.1
GABPB1-206ENST00000543881 MS4A1P11836 297 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-206ENST00000543881 MORN1Q5T089 497 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 MIGA1Q8NAN2 632 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 FAM161BQ96MY7 647 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 APBA2Q99767 749 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
GABPB1-206ENST00000543881 FRMPD3Q5JV73 1810 aa14.45□□□□□ -0.1
GABPB1-206ENST00000543881 PLEKHH3Q7Z736 793 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 MAGEB6Q8N7X4 407 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 LBHD1Q9BQE6 289 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 PAGR1Q9BTK6 254 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 SENP6Q9GZR1 1112 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 RCAN3Q9UKA8 241 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 DDX19BQ9UMR2 479 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 APBB1O00213 710 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 GDF11O95390 407 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 FOXP4Q8IVH2 680 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 GTF3C2Q8WUA4 911 aaPredicted RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 TRIM34Q9BYJ4 488 aa14.44□□□□□ -0.1
GABPB1-206ENST00000543881 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
GABPB1-206ENST00000543881 DNAH12Q6ZR08 3092 aa14.43□□□□□ -0.1
GABPB1-206ENST00000543881 LAMA2P24043 3122 aaKnown RBP14.43□□□□□ -0.1
GABPB1-206ENST00000543881 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
GABPB1-206ENST00000543881 CRACR2BQ8N4Y2 399 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-206ENST00000543881 GINM1Q9NU53 330 aa14.43□□□□□ -0.1
GABPB1-206ENST00000543881 ZBTB21Q9ULJ3 1066 aa14.43□□□□□ -0.1
GABPB1-206ENST00000543881 MAP3K12Q12852 859 aa14.42□□□□□ -0.1
GABPB1-206ENST00000543881 MAP2K5Q13163 448 aa14.42□□□□□ -0.1
GABPB1-206ENST00000543881 KIF1BPQ96EK5 621 aa14.42□□□□□ -0.1
GABPB1-206ENST00000543881 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
GABPB1-206ENST00000543881 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
GABPB1-206ENST00000543881 ATN1P54259 1190 aaPredicted RBP14.41□□□□□ -0.1
GABPB1-206ENST00000543881 ZNF697Q5TEC3 545 aa14.41□□□□□ -0.1
GABPB1-206ENST00000543881 MFSD14CQ5VZR4 134 aa14.41□□□□□ -0.1
GABPB1-206ENST00000543881 USP17L2Q6R6M4 530 aa14.41□□□□□ -0.1
GABPB1-206ENST00000543881 CLASRPQ8N2M8 674 aaKnown RBP14.41□□□□□ -0.1
GABPB1-206ENST00000543881 RIOK1Q9BRS2 568 aaKnown RBP14.41□□□□□ -0.1
GABPB1-206ENST00000543881 FLRT1Q9NZU1 646 aa14.41□□□□□ -0.1
GABPB1-206ENST00000543881 GLRX3O76003 335 aaKnown RBP14.4□□□□□ -0.1
GABPB1-206ENST00000543881 USP5P45974 858 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 WDR78Q5VTH9 848 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 LPAR1Q92633 364 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 BCL11AQ9H165 835 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 PRKAG2Q9UGJ0 569 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 DDX20Q9UHI6 824 aaKnown RBP14.4□□□□□ -0.1
GABPB1-206ENST00000543881 RABGAP1Q9Y3P9 1069 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 MYH1P12882 1939 aa14.4□□□□□ -0.1
GABPB1-206ENST00000543881 MSCO60682 206 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 HMMRO75330 724 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 CNMDO75829 334 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 HLA-DOAP06340 250 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 CNGA1P29973 690 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 CCNA1P78396 465 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 LTBP2Q14767 1821 aa14.39□□□□□ -0.11
GABPB1-206ENST00000543881 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 DNM1LO00429 736 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 GOLIM4O00461 696 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 GH2P01242 217 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 IFIT2P09913 472 aaKnown RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 PDE6AP16499 860 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 TTF1Q15361 905 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 ZYXQ15942 572 aaKnown RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 SLC9C2Q5TAH2 1124 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 TMED8Q6PL24 325 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 C12orf42Q96LP6 360 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 DNAJC2Q99543 621 aaKnown RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
GABPB1-206ENST00000543881 FEZ1Q99689 392 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 EYSQ5T1H1 3165 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 MAGEB6P1A0A0J9YX57 407 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 PTPREP23469 700 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms