RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 TDO2P48775 406 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 CACNB3P54284 484 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 GLIPR1L2Q4G1C9 344 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 C15orf52Q6ZUT6 534 aaKnown RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 IFNL3Q8IZI9 196 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 EVA1BQ9NVM1 165 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 PIM2Q9P1W9 311 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 SCAF8Q9UPN6 1271 aaKnown RBP9.17□□□□□ -0.94
AC005840.3-201ENST00000541888 NEDD4P46934 1319 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 NAV1Q8NEY1 1877 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 WNT7AO00755 349 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 PRDM1O75626 825 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 PRELPP51888 382 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 ANAPC15P60006 121 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 SKOR1P84550 965 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 QPCTQ16769 361 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 LRRFIP1Q32MZ4 808 aaKnown RBP9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 RRP12Q5JTH9 1297 aaKnown RBP9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 TMC4Q7Z404 712 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 NECAB1Q8N987 351 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 TTC14Q96N46 770 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 ZKSCAN3Q9BRR0 538 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 COA1Q9GZY4 146 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 NAPBQ9H115 298 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 SAP30BPQ9UHR5 308 aaKnown RBP9.16□□□□□ -0.94
AC005840.3-201ENST00000541888 LAMB1P07942 1786 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 SHTN1A0MZ66 631 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 ZNF213O14771 459 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 BTDP43251 543 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 PKP1Q13835 747 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 TUSC1Q2TAM9 212 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 DALRD3Q5D0E6 543 aaKnown RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 RNF20Q5VTR2 975 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 CYP4X1Q8N118 509 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 SNX21Q969T3 373 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 TMX3Q96JJ7 454 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 NEK1Q96PY6 1258 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 TOMM22Q9NS69 142 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 NAP1L2Q9ULW6 460 aaPredicted RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 TTF2Q9UNY4 1162 aaKnown RBP9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 MYH1P12882 1939 aa9.15□□□□□ -0.94
AC005840.3-201ENST00000541888 ECM29Q5VYK3 1845 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 B4E1Z4 1266 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 PATL2C9JE40 543 aaKnown RBP9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 NFKBIEO00221 500 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 RPS6KB1P23443 525 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 PICALMQ13492 652 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 IMMTQ16891 758 aaKnown RBP9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 Q6ZUG5 572 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 MAPKAPK5Q8IW41 473 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 TGFBRAP1Q8WUH2 860 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 KCNB2Q92953 911 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 CHAMP1Q96JM3 812 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 EYA3Q99504 573 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 RTFDC1Q9BY42 306 aaPredicted RBP9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 TPCN1Q9ULQ1 816 aa9.15□□□□□ -0.95
AC005840.3-201ENST00000541888 WNT7BP56706 349 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 APOBRQ0VD83 1088 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 KIAA2012Q0VF49 1180 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 ST3GAL1Q11201 340 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 BRF1Q92994 677 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 MRGPRX2Q96LB1 330 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 DAGLAQ9Y4D2 1042 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 PDS5AQ29RF7 1337 aaKnown RBP9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 SALL1Q9NSC2 1324 aa9.14□□□□□ -0.95
AC005840.3-201ENST00000541888 PSME4Q14997 1843 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 USP17L12C9JPN9 530 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 USP17L21D6R901 530 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 LILRB3O75022 631 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 RXRAP19793 462 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 ANTXR2P58335 489 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 TGFB2P61812 414 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 ME3Q16798 604 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 DACT2Q5SW24 774 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 CTR9Q6PD62 1173 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 CCDC83Q8IWF9 413 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 SLC44A5Q8NCS7 719 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 DYNLL2Q96FJ2 89 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms