RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
GCFC2-211ENST00000541687 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
GCFC2-211ENST00000541687 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 TXLNBQ8N3L3 684 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 ALS2CR12Q96Q35 445 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 PPP1R1BQ9UD71 204 aaPredicted RBP16.32■□□□□ 0.2
GCFC2-211ENST00000541687 NEDD4P46934 1319 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 SIK1P57059 783 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 SUSD4Q5VX71 490 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
GCFC2-211ENST00000541687 KRT86O43790 486 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 DYMQ7RTS9 669 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 ZNF804AQ7Z570 1209 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 MB21D2Q8IYB1 491 aaPredicted RBP16.31■□□□□ 0.2
GCFC2-211ENST00000541687 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 SPATA31A3Q5VYP0 1347 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.24e-7■■■■■ 203.4
GCFC2-211ENST00000541687 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 AP5Z1O43299 807 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 CDC25BP30305 580 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 EXOSC10Q01780 885 aaKnown RBP16.31■□□□□ 0.2
GCFC2-211ENST00000541687 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 REREQ9P2R6 1566 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 FAM170AA1A519 330 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 ERLIN2O94905 339 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 ARID4AP29374 1257 aaPredicted RBP16.31■□□□□ 0.2
GCFC2-211ENST00000541687 ST3GAL1Q11201 340 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
GCFC2-211ENST00000541687 NOC4LQ9BVI4 516 aaKnown RBP16.31■□□□□ 0.2
GCFC2-211ENST00000541687 PPP6R2O75170 966 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 RAD51AP2Q09MP3 1159 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 INF2Q27J81 1249 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 FERMT2Q96AC1 680 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 CAPN2P17655 700 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 DNAJC21Q5F1R6 531 aaKnown RBP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 ZNF622Q969S3 477 aaKnown RBP eCLIP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 SPAG5Q96R06 1193 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 FOXN1O15353 648 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 UFL1O94874 794 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 MMP1P03956 469 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 GNA11P29992 359 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 PRPF4BQ13523 1007 aaKnown RBP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 SPTLC3Q9NUV7 552 aa16.3■□□□□ 0.2
GCFC2-211ENST00000541687 BCCIPQ9P287 314 aaKnown RBP eCLIP16.3■□□□□ 0.2
GCFC2-211ENST00000541687 IFNAR1P17181 557 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 MAN1B1Q9UKM7 699 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
GCFC2-211ENST00000541687 KRT83P78385 493 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 TIGD1Q96MW7 591 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 IL6STP40189 918 aaPredicted RBP16.29■□□□□ 0.2
GCFC2-211ENST00000541687 FAM107BQ9H098 131 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 KIF20BQ96Q89 1820 aa16.29■□□□□ 0.2
GCFC2-211ENST00000541687 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 SEC31AO94979 1220 aaKnown RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 USP8P40818 1118 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 PPARDQ03181 441 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 IPO4Q8TEX9 1081 aaKnown RBP16.28■□□□□ 0.2
GCFC2-211ENST00000541687 CASP14P31944 242 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 TBC1D7Q9P0N9 293 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
GCFC2-211ENST00000541687 TACC1O75410 805 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
GCFC2-211ENST00000541687 IQCB1Q15051 598 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 CNBD1Q8NA66 436 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
GCFC2-211ENST00000541687 IKBKBO14920 756 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 SCG2P13521 617 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 MCM3P25205 808 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 ST5P78524 1137 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.2
GCFC2-211ENST00000541687 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.19
GCFC2-211ENST00000541687 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms