RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ZNF274Q96GC6 653 aaPredicted RBP5.93□□□□□ -1.46
PROM1-220ENST00000540805 AGXT2Q9BYV1 514 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 EHD4Q9H223 541 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 ZNF408Q9H9D4 720 aa5.93□□□□□ -1.46
PROM1-220ENST00000540805 SPATA31A5Q5VU36 1347 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 SPATA31A7Q8IWB4 1347 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 TAF1P21675 1872 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 TMEM232C9JQI7 657 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 PDIA3P30101 505 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 TRIM28Q13263 835 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 HLFQ16534 295 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 HDXQ7Z353 690 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 TMEM139Q8IV31 216 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 ZNF444Q8N0Y2 327 aaPredicted RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 KIFC2Q96AC6 838 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 CALR3Q96L12 384 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 SCLT1Q96NL6 688 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 NLRP3Q96P20 1036 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 HSD3B7Q9H2F3 369 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 PDE11AQ9HCR9 933 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 GNPATO15228 680 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 STX10O60499 249 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 CMA1P23946 247 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 SYKP43405 635 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 EXOSC10Q01780 885 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 MAP3K12Q12852 859 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 OTUD7BQ6GQQ9 843 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 INTS5Q6P9B9 1019 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 SYNE4Q8N205 404 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 MARCH10Q8NA82 808 aaPredicted RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 DEF6Q9H4E7 631 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 VEZTQ9HBM0 779 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 TUBE1Q9UJT0 475 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 NDUFB9Q9Y6M9 179 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 UBN2Q6ZU65 1347 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 SH3TC1Q8TE82 1336 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 SRCAPQ6ZRS2 3230 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 FOXP2O15409 715 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 CSF1RP07333 972 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 KARSQ15046 597 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 TNNI3KQ59H18 835 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 ANO1Q5XXA6 986 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 LMBR1LQ6UX01 489 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 DNAJC10Q8IXB1 793 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 GDAP1L1Q96MZ0 367 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 DSCC1Q9BVC3 393 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 ZC3H12CQ9C0D7 883 aaKnown RBP5.92□□□□□ -1.46
PROM1-220ENST00000540805 FPGT-TNNI3KV9GXZ4 949 aa5.92□□□□□ -1.46
PROM1-220ENST00000540805 MROH7-TTC4A0A0A0MT08 1334 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 RGPD3A6NKT7 1758 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 RGPD4Q7Z3J3 1758 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 E7EWF7 191 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 FDPSP14324 419 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 PAX7P23759 505 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 MAGEA9P43362 315 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 MNAT1P51948 309 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 HSP90AB3PQ58FF7 597 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 HSP90AA4PQ58FG1 418 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 NAIF1Q69YI7 327 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 TOGARAM2Q6ZUX3 1019 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 SRGAP1Q7Z6B7 1085 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 CEP112Q8N8E3 955 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 HNRNPLLQ8WVV9 542 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 CDC5LQ99459 802 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 CWC25Q9NXE8 425 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 FAN1Q9Y2M0 1017 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 ZBTB12Q9Y330 459 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 MAP2K2P36507 400 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 MATR3P43243 847 aaKnown RBP eCLIP5.91□□□□□ -1.46
PROM1-220ENST00000540805 TFCP2Q12800 502 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 HSP90B2PQ58FF3 399 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 AXDND1Q5T1B0 1012 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 OGFOD1Q8N543 542 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 JPH2Q9BR39 696 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 PLA2G12BQ9BX93 195 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 IRX2Q9BZI1 471 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 ACBD3Q9H3P7 528 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 DONSONQ9NYP3 566 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 AKAP2Q9Y2D5 859 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 RTCBQ9Y3I0 505 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 A0A0U1RQJ8 604 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 CUTAO60888 179 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 RPS6KA5O75582 802 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 SLC5A1P13866 664 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 INHBEP58166 350 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 PICALMQ13492 652 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 PNOCQ13519 176 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 IMMTQ16891 758 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 BEND6Q5SZJ8 279 aaPredicted RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 CHST3Q7LGC8 479 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 PTF1AQ7RTS3 328 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 MSL3Q8N5Y2 521 aaKnown RBP5.91□□□□□ -1.46
PROM1-220ENST00000540805 VGLL2Q8N8G2 317 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 JMYQ8N9B5 988 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 KBTBD3Q8NAB2 608 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 ATRIPQ8WXE1 791 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 HAUS7Q99871 368 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 TANGO6Q9C0B7 1094 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 GBP3Q9H0R5 595 aa5.91□□□□□ -1.46
PROM1-220ENST00000540805 FANCLQ9NW38 375 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms