RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 ZNF444Q8N0Y2 327 aaPredicted RBP9.09□□□□□ -0.95
GNE-205ENST00000539815 XAGE2Q96GT9 111 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 GINM1Q9NU53 330 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 COL24A1Q17RW2 1714 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 KCNJ6P48051 423 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 ERVK-24P63145 666 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 GJC2Q5T442 439 aaPredicted RBP9.09□□□□□ -0.95
GNE-205ENST00000539815 SPATA5Q8NB90 893 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
GNE-205ENST00000539815 SERPINB13Q9UIV8 391 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 SLC45A1Q9Y2W3 748 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 LRP10Q7Z4F1 713 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
GNE-205ENST00000539815 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 CYP2C19P33261 490 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 CAP2P40123 477 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 ADCYAP1R1P41586 468 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.96
GNE-205ENST00000539815 ERC1Q8IUD2 1116 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 STK11IPQ8N1F8 1099 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 DIS3LQ8TF46 1054 aaKnown RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 XPNPEP3Q9NQH7 507 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 PA2G4Q9UQ80 394 aaKnown RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 SCN7AQ01118 1682 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 POLR2AP24928 1970 aaKnown RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 TBC1D9Q6ZT07 1266 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 MYLIPQ8WY64 445 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 ZNF592Q92610 1267 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 DDX20Q9UHI6 824 aaKnown RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 A0A0G2JLL6 359 aaPredicted RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 STRNO43815 780 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 BCRP11274 1271 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 FOXO4P98177 505 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 COG2Q14746 738 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 RAB30Q15771 203 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 ZSCAN25Q6NSZ9 544 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 PRRT2Q7Z6L0 340 aaPredicted RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 PCSK9Q8NBP7 692 aaKnown RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 THEGQ9P2T0 379 aa9.08□□□□□ -0.96
GNE-205ENST00000539815 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.08□□□□□ -0.96
GNE-205ENST00000539815 MROH7-TTC4A0A0A0MT08 1334 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 SLC15A5A6NIM6 579 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 IBSPP21815 317 aaPredicted RBP9.07□□□□□ -0.96
GNE-205ENST00000539815 COPB2P35606 906 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 FPGSQ05932 587 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 GPR142Q7Z601 462 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 PIAS4Q8N2W9 510 aaPredicted RBP9.07□□□□□ -0.96
GNE-205ENST00000539815 PPP1R12CQ9BZL4 782 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 MTMR10Q9NXD2 777 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 TTF1Q15361 905 aaPredicted RBP9.07□□□□□ -0.96
GNE-205ENST00000539815 TJAP1Q5JTD0 557 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 NOL9Q5SY16 702 aaKnown RBP9.07□□□□□ -0.96
GNE-205ENST00000539815 ZBTB33Q86T24 672 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 MMP19Q99542 508 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 FAM50BQ9Y247 325 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 ANKRD31Q8N7Z5 1873 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 GOPCQ9HD26 462 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
GNE-205ENST00000539815 MECOMQ03112 1051 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 TLE2Q04725 743 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
GNE-205ENST00000539815 ZBED3Q96IU2 234 aaPredicted RBP9.06□□□□□ -0.96
GNE-205ENST00000539815 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 PDCL3Q9H2J4 239 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 SPDYE4A6NLX3 237 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 C1QTNF1Q9BXJ1 281 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 FAM184BQ9ULE4 1060 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 COL11A2P13942 1736 aaPredicted RBP9.06□□□□□ -0.96
GNE-205ENST00000539815 BRCA1P38398 1863 aaKnown RBP9.06□□□□□ -0.96
GNE-205ENST00000539815 MINDY4BA8MYZ0 360 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 ICA1Q05084 483 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 TFCP2Q12800 502 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 LRIT3Q3SXY7 679 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 CHMP4CQ96CF2 233 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 TIFAQ96CG3 184 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 TEPSINQ96N21 525 aa9.06□□□□□ -0.96
GNE-205ENST00000539815 RPAP3Q9H6T3 665 aaPredicted RBP9.06□□□□□ -0.96
GNE-205ENST00000539815 RAD50Q92878 1312 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 ANP32AP39687 249 aaKnown RBP9.05□□□□□ -0.96
GNE-205ENST00000539815 TDO2P48775 406 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 FAM193AP78312 1265 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 CCDC96Q2M329 555 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 GPR153Q6NV75 609 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 IDI2Q9BXS1 227 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 MROH7Q68CQ1 1323 aa9.05□□□□□ -0.96
GNE-205ENST00000539815 DDTLA6NHG4 134 aaPredicted RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 SLC25A27O95847 323 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
GNE-205ENST00000539815 PPP4R3BQ5MIZ7 849 aa9.04□□□□□ -0.96
GNE-205ENST00000539815 LPAR1Q92633 364 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms