RNA–Protein interactions for RNA: ENST00000539409.5

FAM60A-206, Transcript of Protein FAM60A, humanhuman

TSL 1 (best) BASIC

Gene FAM60A, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-206ENST00000539409 HPS5Q9UPZ3 1129 aa13.4□□□□□ -0.26
FAM60A-206ENST00000539409 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 STK3Q13188 491 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 CUL4AQ13619 759 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 PAPPA2Q9BXP8 1791 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 STX8Q9UNK0 236 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 PFKFB2O60825 505 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 GH2P01242 217 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 GTF3C6Q969F1 213 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
FAM60A-206ENST00000539409 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
FAM60A-206ENST00000539409 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
FAM60A-206ENST00000539409 NID2Q14112 1375 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 CAP2P40123 477 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 RAB11FIP4Q86YS3 637 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 ZNF341Q9BYN7 854 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 MYH4Q9Y623 1939 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 ZBTB43O43298 467 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 SCRN1Q12765 414 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 SEPT2Q15019 361 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 CDC37L1Q7L3B6 337 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 TMEM47Q9BQJ4 181 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 SLKQ9H2G2 1235 aaPredicted RBP13.38□□□□□ -0.27
FAM60A-206ENST00000539409 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
FAM60A-206ENST00000539409 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 TTLL1O95922 423 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 RXRAP19793 462 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 RCAN1P53805 252 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 TROAPQ12815 778 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 MAP1SQ66K74 1059 aaPredicted RBP13.37□□□□□ -0.27
FAM60A-206ENST00000539409 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 KAT14Q9H8E8 782 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
FAM60A-206ENST00000539409 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 CCT2P78371 535 aaKnown RBP13.37□□□□□ -0.27
FAM60A-206ENST00000539409 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 PNMA1Q8ND90 353 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
FAM60A-206ENST00000539409 DDAH1O94760 285 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 ICA1Q05084 483 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 KLRG1Q96E93 195 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 FOXD4L1Q9NU39 408 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 CTNND1O60716 968 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 ASNSP08243 561 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 EEF2P13639 858 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 INPP5BP32019 993 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
FAM60A-206ENST00000539409 NYAP2Q9P242 653 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
FAM60A-206ENST00000539409 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
FAM60A-206ENST00000539409 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
FAM60A-206ENST00000539409 FAM217BQ9NTX9 383 aaPredicted RBP13.35□□□□□ -0.27
FAM60A-206ENST00000539409 PRKG1Q13976 671 aa13.35□□□□□ -0.27
FAM60A-206ENST00000539409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.35□□□□□ -0.27
FAM60A-206ENST00000539409 TRAF5O00463 557 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
FAM60A-206ENST00000539409 CALM1P0DP23 149 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 CALM2P0DP24 149 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 CALM3P0DP25 149 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 CDC27P30260 824 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
FAM60A-206ENST00000539409 MKL1Q969V6 931 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 GINM1Q9NU53 330 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
FAM60A-206ENST00000539409 DTNBO60941 627 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 NF2P35240 595 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 RTN1Q16799 776 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 SCYL3Q8IZE3 742 aa13.34□□□□□ -0.27
FAM60A-206ENST00000539409 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms