RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 MAPKAPK5Q8IW41 473 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 WDR63Q8IWG1 891 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 CCAR1Q8IX12 1150 aaKnown RBP6.49□□□□□ -1.37
CHD4-205ENST00000536301 ACER1Q8TDN7 264 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 XAGE2Q96GT9 111 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ASB2Q96Q27 587 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 UHRF1Q96T88 793 aaPredicted RBP6.49□□□□□ -1.37
CHD4-205ENST00000536301 TBC1D2Q9BYX2 928 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 PRDM12Q9H4Q4 367 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ZNF576Q9H609 170 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 AS3MTQ9HBK9 375 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 GNL3LQ9NVN8 582 aaKnown RBP6.49□□□□□ -1.37
CHD4-205ENST00000536301 HMG20BQ9P0W2 317 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ZNF236Q9UL36 1845 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 SLC15A5A6NIM6 579 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 CIAO1O76071 339 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 ASNSP08243 561 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 IRX5P78411 483 aaPredicted RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 ZGPATQ8N5A5 531 aaKnown RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 LENG1Q96BZ8 264 aaPredicted RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 TIFAQ96CG3 184 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 THEGQ9P2T0 379 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 SAP30BPQ9UHR5 308 aaKnown RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 HERC5Q9UII4 1024 aaKnown RBP6.48□□□□□ -1.37
CHD4-205ENST00000536301 PALD1Q9ULE6 856 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 RABGAP1Q9Y3P9 1069 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 MCM3APO60318 1980 aa6.48□□□□□ -1.37
CHD4-205ENST00000536301 A0A1B0GUL7 405 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 SPDYE16A6NNV3 312 aaPredicted RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 C19orf81C9J6K1 198 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 KBTBD13C9JR72 458 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 KIAA0355O15063 1070 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 ZBTB22O15209 634 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 SEPT4O43236 478 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 MSCO60682 206 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 PQBP1O60828 265 aaKnown RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 GH2P01242 217 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 CLTBP09497 229 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 TAL1P17542 331 aaPredicted RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 ADORA2AP29274 412 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 MCAMP43121 646 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 DYNLL1P63167 89 aaKnown RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 TFF2Q03403 129 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 EVX2Q03828 476 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 TFCP2Q12800 502 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 CATSPERGQ6ZRH7 1159 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 C16orf59Q7L2K0 433 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 METTL16Q86W50 562 aaKnown RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 SLF2Q8IX21 1173 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 ATXN2LQ8WWM7 1075 aaKnown RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 KHSRPQ92945 711 aaKnown RBP eCLIP6.47□□□□□ -1.378e-7■□□□□ 9.6
CHD4-205ENST00000536301 C12orf42Q96LP6 360 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.47□□□□□ -1.379e-12■■□□□ 11.6
CHD4-205ENST00000536301 EPHX3Q9H6B9 360 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 AATFQ9NY61 560 aaKnown RBP eCLIP6.47□□□□□ -1.37
CHD4-205ENST00000536301 RAI14Q9P0K7 980 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 PI4KBQ9UBF8 816 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 COL11A1P12107 1806 aaPredicted RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 PARP14Q460N5 1801 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 A0A0G2JMZ2 1700 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 FLT1P17948 1338 aa6.47□□□□□ -1.37
CHD4-205ENST00000536301 PDS5AQ29RF7 1337 aaKnown RBP6.47□□□□□ -1.37
CHD4-205ENST00000536301 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L15C9J2P7 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L13C9JLJ4 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L11C9JVI0 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L18D6R9N7 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L22D6RA61 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L17D6RBQ6 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L19D6RCP7 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L20D6RJB6 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 PGK1P00558 417 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 BMP1P13497 986 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 RAG1P15918 1043 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 VCAM1P19320 739 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 GUCY1A2P33402 732 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 IL15P40933 162 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 KCNQ1P51787 676 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 MRPS5P82675 430 aaKnown RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 FPGSQ05932 587 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 FAAP100Q0VG06 881 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 USP17L24Q0WX57 530 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 KIAA1755Q5JYT7 1200 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 TMEM240Q5SV17 173 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 SPTY2D1Q68D10 685 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 ARRDC4Q8NCT1 418 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 GTF3C2Q8WUA4 911 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 LRFN3Q9BTN0 628 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 MOV10L1Q9BXT6 1211 aaKnown RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 RPAP3Q9H6T3 665 aaPredicted RBP6.46□□□□□ -1.38
CHD4-205ENST00000536301 SNRKQ9NRH2 765 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 PHF24Q9UPV7 400 aa6.46□□□□□ -1.38
CHD4-205ENST00000536301 A0A1W2PQ45 241 aaPredicted RBP6.45□□□□□ -1.38
CHD4-205ENST00000536301 A0A1W2PQY0 241 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms