RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 MFSD14BQ5SR56 506 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 DPF2Q92785 391 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
ATP2C1-224ENST00000533801 ADAMTS3O15072 1205 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 GTF2IP78347 998 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 PRR5LQ6MZQ0 368 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 FOXP4Q8IVH2 680 aaPredicted RBP18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 SFPQP23246 707 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 CLEC10AQ8IUN9 316 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 EEF2KMTQ96G04 330 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 CAVIN2O95810 425 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 SLURP2P0DP57 97 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 SCNN1DP51172 638 aa18.22■□□□□ 0.51
ATP2C1-224ENST00000533801 BTDP43251 543 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 NAA30Q147X3 362 aaPredicted RBP18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 POSTNQ15063 836 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 SMTNL1A8MU46 457 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 HSPA1LP34931 641 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 ST5P78524 1137 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 GRAPQ13588 217 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 RESP18Q5W5W9 173 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 SHISA4Q96DD7 197 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 BAG3O95817 575 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 BRIP1Q9BX63 1249 aa18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 HOOK1Q9UJC3 728 aaKnown RBP18.21■□□□□ 0.51
ATP2C1-224ENST00000533801 PPP6R2O75170 966 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 TROAPQ12815 778 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 PTGDRQ13258 359 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 GGA1Q9UJY5 639 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 PLCH1Q4KWH8 1693 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 PKN1Q16512 942 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 TTC38Q5R3I4 469 aa18.2■□□□□ 0.5
ATP2C1-224ENST00000533801 MYL5Q02045 173 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 CEP131Q9UPN4 1083 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 MPHOSPH10O00566 681 aaKnown RBP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 TM4SF1P30408 202 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 ZNF622Q969S3 477 aaKnown RBP eCLIP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 UBA5Q9GZZ9 404 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 FBXO2Q9UK22 296 aaPredicted RBP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 NFE2L3Q9Y4A8 694 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 RBM5P52756 815 aaKnown RBP eCLIP18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 SLC10A5Q5PT55 438 aa18.19■□□□□ 0.5
ATP2C1-224ENST00000533801 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 TMTC3Q6ZXV5 915 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 USP17L2Q6R6M4 530 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 WDR66Q8TBY9 1149 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 MRFAP1L1Q96HT8 127 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 ARPP21Q9UBL0 812 aaPredicted RBP18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 XDHP47989 1333 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 NRDCO43847 1150 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 MAN1B1Q9UKM7 699 aa18.18■□□□□ 0.5
ATP2C1-224ENST00000533801 ANKRD36CQ5JPF3 1778 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 FRMPD2Q68DX3 1309 aaPredicted RBP18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 CCDC194A0A1B0GVG4 234 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 SCG2P13521 617 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 PTPREP23469 700 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 SAMSN1Q9NSI8 373 aaKnown RBP18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 CEP135Q66GS9 1140 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 CD209Q9NNX6 404 aa18.17■□□□□ 0.5
ATP2C1-224ENST00000533801 STK36Q9NRP7 1315 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 PP2D1A8MPX8 630 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 CACNB3P54284 484 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 FMR1Q06787 632 aaKnown RBP eCLIP18.16■□□□□ 0.52e-20■■■■■ 71.1
ATP2C1-224ENST00000533801 INF2Q27J81 1249 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 LRRC47Q8N1G4 583 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 KIF5BP33176 963 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 A0A087X0B3 334 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 RBM6P78332 1123 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 RC3H1Q5TC82 1133 aaKnown RBP18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 ZBTB9Q96C00 473 aa18.16■□□□□ 0.5
ATP2C1-224ENST00000533801 BMP6P22004 513 aa18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 ADKP55263 362 aaKnown RBP18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 TCP10Q12799 353 aa18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 AHDC1Q5TGY3 1603 aaPredicted RBP18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 FAM196BA6NMK8 535 aa18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 PRPF3O43395 683 aaKnown RBP18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 CALM1P0DP23 149 aa18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 CALM2P0DP24 149 aa18.15■□□□□ 0.5
ATP2C1-224ENST00000533801 CALM3P0DP25 149 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms