RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 USP17L10C9JJH3 530 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 HIP1O00291 1037 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 FGRP09769 529 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 CHMLP26374 656 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 PPARAQ07869 468 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 RAB3GAP1Q15042 981 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 GADL1Q6ZQY3 521 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 TMEM179Q6ZVK1 233 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 NAPBQ9H115 298 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 CABP5Q9NP86 173 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
TSPAN4-220ENST00000532375 FKTNO75072 461 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 CYP2C8P10632 490 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 KIAA1683Q9H0B3 1180 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 INCENPQ9NQS7 918 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 DIAPH3Q9NSV4 1193 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
TSPAN4-220ENST00000532375 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 PRDM1O75626 825 aa16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 BCRP11274 1271 aa16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
TSPAN4-220ENST00000532375 MPHOSPH10O00566 681 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 SP3Q02447 781 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
TSPAN4-220ENST00000532375 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 ASCC2Q9H1I8 757 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 MKNK2Q9HBH9 465 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 ZSWIM8A7E2V4 1837 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 RLFQ13129 1914 aa16.6■□□□□ 0.25
TSPAN4-220ENST00000532375 EEF2P13639 858 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 CTGFP29279 349 aa16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 MFAP1P55081 439 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 BMP2KLQ5H9B9 411 aa16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 NEDD1Q8NHV4 660 aa16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
TSPAN4-220ENST00000532375 DOCK3Q8IZD9 2030 aa16.58■□□□□ 0.25
TSPAN4-220ENST00000532375 SGSM2O43147 1006 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 ORC4O43929 436 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 USP14P54578 494 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 ICA1Q05084 483 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 P2RX7Q99572 595 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 TMOD4Q9NZQ9 345 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
TSPAN4-220ENST00000532375 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 RAD50Q92878 1312 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 VCAM1P19320 739 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 HAND2P61296 217 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 PTH1RQ03431 593 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 PDE4BQ07343 736 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 CATSPERGQ6ZRH7 1159 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 MKL1Q969V6 931 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
TSPAN4-220ENST00000532375 MGAMO43451 1857 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 SLC3A2P08195 630 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 NOVP48745 357 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 LACTBP83111 547 aaPredicted RBP16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 TFAP4Q01664 338 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 OTOP1Q7RTM1 612 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 TBC1D10CQ8IV04 446 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 TNS4Q8IZW8 715 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 FEZ1Q99689 392 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 VCPKMTQ9H867 229 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 ZNF287Q9HBT7 754 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 MTMR4Q9NYA4 1195 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L15C9J2P7 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L13C9JLJ4 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L11C9JVI0 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L18D6R9N7 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L22D6RA61 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L17D6RBQ6 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L19D6RCP7 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 USP17L20D6RJB6 530 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 PEX10O60683 326 aa16.55■□□□□ 0.24
TSPAN4-220ENST00000532375 OSBPP22059 807 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms