RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 MS4A4AQ96JQ5 239 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 FEZ1Q99689 392 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 CNNM2Q9H8M5 875 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 ARHGEF10LQ9HCE6 1279 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 NEDD4P46934 1319 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 USP17L10C9JJH3 530 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 SLC27A2O14975 620 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 TRDNQ13061 729 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 NECTIN1Q15223 517 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 CREB3L3Q68CJ9 461 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.34■■□□□ 1.81
LRRK1-208ENST00000532029 KRT23Q9C075 422 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 PHIPQ8WWQ0 1821 aa26.34■■□□□ 1.81
LRRK1-208ENST00000532029 PLIN4Q96Q06 1357 aa26.33■■□□□ 1.81
LRRK1-208ENST00000532029 BACE1P56817 501 aa26.33■■□□□ 1.81
LRRK1-208ENST00000532029 ATP2B2Q01814 1243 aa26.33■■□□□ 1.81
LRRK1-208ENST00000532029 MTMR2Q13614 643 aa26.33■■□□□ 1.81
LRRK1-208ENST00000532029 SH2D4AQ9H788 454 aa26.33■■□□□ 1.81
LRRK1-208ENST00000532029 A0A0G2JLL6 359 aaPredicted RBP26.32■■□□□ 1.8
LRRK1-208ENST00000532029 TESPA1A2RU30 521 aaPredicted RBP26.32■■□□□ 1.8
LRRK1-208ENST00000532029 C19orf81C9J6K1 198 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 TM4SF4P48230 202 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 MAP2K1Q02750 393 aaPredicted RBP26.32■■□□□ 1.8
LRRK1-208ENST00000532029 PPP4R3BQ5MIZ7 849 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 OTUD7BQ6GQQ9 843 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 GADL1Q6ZQY3 521 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 FASTKD5Q7L8L6 764 aaKnown RBP26.32■■□□□ 1.8
LRRK1-208ENST00000532029 PRRT2Q7Z6L0 340 aaPredicted RBP26.32■■□□□ 1.8
LRRK1-208ENST00000532029 CLEC10AQ8IUN9 316 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 ACER1Q8TDN7 264 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 BRI3BPQ8WY22 251 aa26.32■■□□□ 1.8
LRRK1-208ENST00000532029 B4E1Z4 1266 aa26.31■■□□□ 1.8
LRRK1-208ENST00000532029 E7EWF7 191 aa26.31■■□□□ 1.8
LRRK1-208ENST00000532029 EPB41L2O43491 1005 aaKnown RBP26.31■■□□□ 1.8
LRRK1-208ENST00000532029 USP14P54578 494 aa26.31■■□□□ 1.8
LRRK1-208ENST00000532029 HMGCS2P54868 508 aa26.31■■□□□ 1.8
LRRK1-208ENST00000532029 RALYLQ86SE5 291 aaKnown RBP26.31■■□□□ 1.8
LRRK1-208ENST00000532029 TMOD4Q9NZQ9 345 aa26.31■■□□□ 1.8
LRRK1-208ENST00000532029 IGKV6D-41A0A0C4DH26 115 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 KDM4AO75164 1064 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 EEF2P13639 858 aaKnown RBP26.3■■□□□ 1.8
LRRK1-208ENST00000532029 SH3D19Q5HYK7 790 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 USP17L2Q6R6M4 530 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 CEP95Q96GE4 821 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 KIAA1683Q9H0B3 1180 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 NYAP2Q9P242 653 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 TAF6LQ9Y6J9 622 aa26.3■■□□□ 1.8
LRRK1-208ENST00000532029 GREB1LQ9C091 1923 aaPredicted RBP26.29■■□□□ 1.8
LRRK1-208ENST00000532029 ZKSCAN1P17029 563 aaPredicted RBP26.29■■□□□ 1.8
LRRK1-208ENST00000532029 ZYXQ15942 572 aaKnown RBP26.29■■□□□ 1.8
LRRK1-208ENST00000532029 IFNL1Q8IU54 200 aa26.29■■□□□ 1.8
LRRK1-208ENST00000532029 PROCA1Q8NCQ7 364 aaPredicted RBP26.29■■□□□ 1.8
LRRK1-208ENST00000532029 NCOA7Q8NI08 942 aa26.29■■□□□ 1.8
LRRK1-208ENST00000532029 BEGAINQ9BUH8 593 aa26.29■■□□□ 1.8
LRRK1-208ENST00000532029 MTMR4Q9NYA4 1195 aa26.29■■□□□ 1.8
LRRK1-208ENST00000532029 A0A1W2PRG0 241 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 TTLL1O95922 423 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 MCCP23508 829 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 SIAH1Q8IUQ4 282 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 CLIP2Q9UDT6 1046 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 TMX2Q9Y320 296 aa26.28■■□□□ 1.8
LRRK1-208ENST00000532029 IGF2BP3O00425 579 aaKnown RBP eCLIP26.27■■□□□ 1.8
LRRK1-208ENST00000532029 ALDH1A1P00352 501 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 STOX1Q6ZVD7 989 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 ANKRD23Q86SG2 305 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 IQCA1Q86XH1 822 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 PTPN18Q99952 460 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 TCP11L1Q9NUJ3 509 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 STX8Q9UNK0 236 aa26.27■■□□□ 1.8
LRRK1-208ENST00000532029 BTBD19C9JJ37 291 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 NMT2O60551 498 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 HSPA4P34932 840 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 MOGSQ13724 837 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 C8orf34Q49A92 452 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 CCDC178Q5BJE1 867 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 USP26Q9BXU7 913 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 IL17RBQ9NRM6 502 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 ZSWIM5Q9P217 1185 aa26.26■■□□□ 1.79
LRRK1-208ENST00000532029 DGKZQ13574 1117 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 KRT32Q14532 448 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 NKX2-3Q8TAU0 364 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 C12orf42Q96LP6 360 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 GOPCQ9HD26 462 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 EMILIN3Q9NT22 766 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 AGTPBP1Q9UPW5 1226 aa26.25■■□□□ 1.79
LRRK1-208ENST00000532029 PTPRFP10586 1907 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 RAD21O60216 631 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 HSPA1AP0DMV8 641 aaKnown RBP26.24■■□□□ 1.79
LRRK1-208ENST00000532029 HSPA1BP0DMV9 641 aaKnown RBP26.24■■□□□ 1.79
LRRK1-208ENST00000532029 PABPC4Q13310 644 aaKnown RBP eCLIP26.24■■□□□ 1.79
LRRK1-208ENST00000532029 GPAT2Q6NUI2 795 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 FAM43AQ8N2R8 423 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 ZKSCAN3Q9BRR0 538 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 UBAC1Q9BSL1 405 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 VCPKMTQ9H867 229 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 ZCCHC17Q9NP64 241 aaKnown RBP26.24■■□□□ 1.79
LRRK1-208ENST00000532029 WBP1LQ9NX94 342 aa26.24■■□□□ 1.79
LRRK1-208ENST00000532029 PDHXO00330 501 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 TSGA10IPQ3SY00 556 aa26.23■■□□□ 1.79
LRRK1-208ENST00000532029 TREML2Q5T2D2 321 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms