RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
SF3B2-211ENST00000531041 LOC285556D6RIA3 1793 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 ZBTB48P10074 688 aaPredicted RBP19.96■□□□□ 0.79
SF3B2-211ENST00000531041 PPIL2Q13356 520 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
SF3B2-211ENST00000531041 RASAL3Q86YV0 1011 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 OTUD5Q96G74 571 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 CEP95Q96GE4 821 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 C22orf23Q9BZE7 217 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 MTMR4Q9NYA4 1195 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 AFG3L2Q9Y4W6 797 aa19.96■□□□□ 0.79
SF3B2-211ENST00000531041 SLC10A3P09131 477 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 HMGB1P09429 215 aaKnown RBP19.95■□□□□ 0.78
SF3B2-211ENST00000531041 MCM5P33992 734 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 GJA5P36382 358 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 NOVP48745 357 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
SF3B2-211ENST00000531041 ICA1Q05084 483 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 PPP4R3BQ5MIZ7 849 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 SPRYD7Q5W111 196 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 SIAH1Q8IUQ4 282 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 ZNF280CQ8ND82 737 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 TM6SF1Q9BZW5 370 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 NYAP2Q9P242 653 aa19.95■□□□□ 0.78
SF3B2-211ENST00000531041 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
SF3B2-211ENST00000531041 IRF6O14896 467 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 NMT2O60551 498 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 EEF2P13639 858 aaKnown RBP19.94■□□□□ 0.78
SF3B2-211ENST00000531041 PSMA5P28066 241 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 CCDC178Q5BJE1 867 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 CLEC10AQ8IUN9 316 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 JAKMIP1Q96N16 626 aaKnown RBP19.94■□□□□ 0.78
SF3B2-211ENST00000531041 TTC14Q96N46 770 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 MTA3Q9BTC8 594 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 KCNH4Q9UQ05 1017 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 WDR19Q8NEZ3 1342 aa19.94■□□□□ 0.78
SF3B2-211ENST00000531041 CXCL11O14625 94 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 TTLL1O95922 423 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ANTXR2P58335 489 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 HTRA3P83110 453 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 SPP2Q13103 211 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 COL9A3Q14050 684 aaPredicted RBP19.93■□□□□ 0.78
SF3B2-211ENST00000531041 DHX32Q7L7V1 743 aaKnown RBP19.93■□□□□ 0.78
SF3B2-211ENST00000531041 MKL1Q969V6 931 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ZSCAN10Q96SZ4 725 aaPredicted RBP19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ZKSCAN3Q9BRR0 538 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 UBAC1Q9BSL1 405 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ARHGEF10LQ9HCE6 1279 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 USP17L10C9JJH3 530 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 RCSD1Q6JBY9 416 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 CYP4F22Q6NT55 531 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 BLOC1S2Q6QNY1 142 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 DGKHQ86XP1 1220 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ACER1Q8TDN7 264 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 KIAA1683Q9H0B3 1180 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 ZSWIM6Q9HCJ5 1215 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 SYNPO2Q9UMS6 1093 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
SF3B2-211ENST00000531041 A0A1W2PRG0 241 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 TRIM75PA6NK02 468 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 PRC1O43663 620 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 CASTP20810 708 aaKnown RBP19.92■□□□□ 0.78
SF3B2-211ENST00000531041 ECE1P42892 770 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 BACE1P56817 501 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 EXOSC10Q01780 885 aaKnown RBP19.92■□□□□ 0.78
SF3B2-211ENST00000531041 SART3Q15020 963 aaKnown RBP19.92■□□□□ 0.78
SF3B2-211ENST00000531041 SEC23AQ15436 765 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 CHST3Q7LGC8 479 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 ENAHQ8N8S7 591 aaPredicted RBP19.92■□□□□ 0.78
SF3B2-211ENST00000531041 ANKS1AQ92625 1134 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 TMEM87BQ96K49 555 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 CAPNS2Q96L46 248 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 TBC1D32Q96NH3 1257 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 SH2D4AQ9H788 454 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 CLIP2Q9UDT6 1046 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 STX8Q9UNK0 236 aa19.92■□□□□ 0.78
SF3B2-211ENST00000531041 TNKSO95271 1327 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 THSD7BQ9C0I4 1608 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 PARP14Q460N5 1801 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 C19orf81C9J6K1 198 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 ATP2B2Q01814 1243 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 SNAPC2Q13487 334 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 SH3D19Q5HYK7 790 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
SF3B2-211ENST00000531041 RUFY3Q7L099 469 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 IGDCC4Q8TDY8 1250 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 MS4A4AQ96JQ5 239 aa19.91■□□□□ 0.78
SF3B2-211ENST00000531041 A0A0G2JLL6 359 aaPredicted RBP19.9■□□□□ 0.78
SF3B2-211ENST00000531041 ERICH2A1L162 156 aa19.9■□□□□ 0.78
SF3B2-211ENST00000531041 IFIT3O14879 490 aaKnown RBP19.9■□□□□ 0.78
SF3B2-211ENST00000531041 RPS6KB1P23443 525 aa19.9■□□□□ 0.78
SF3B2-211ENST00000531041 GTF2A2P52657 109 aa19.9■□□□□ 0.78
SF3B2-211ENST00000531041 MTMR2Q13614 643 aa19.9■□□□□ 0.78
SF3B2-211ENST00000531041 PRRT2Q7Z6L0 340 aaPredicted RBP19.9■□□□□ 0.78
SF3B2-211ENST00000531041 FEZ1Q99689 392 aa19.9■□□□□ 0.78
SF3B2-211ENST00000531041 TOP1P11387 765 aaKnown RBP19.89■□□□□ 0.77
SF3B2-211ENST00000531041 CPA1P15085 419 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 USP14P54578 494 aa19.89■□□□□ 0.77
SF3B2-211ENST00000531041 MKRN3Q13064 507 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms