RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TMEM179Q6ZVK1 233 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 STK11IPQ8N1F8 1099 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 RASA1P20936 1047 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 SP3Q02447 781 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 DGKZQ13574 1117 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 C17orf99Q6UX52 265 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 TNS4Q8IZW8 715 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 ACER1Q8TDN7 264 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 PARK7Q99497 189 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 EMILIN3Q9NT22 766 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 LOC285556D6RIA3 1793 aa15.11■□□□□ 0.01
CCDC90B-216ENST00000529856 FGAP02671 866 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 CYP2C8P10632 490 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 PPARAQ07869 468 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 SIAH1Q8IUQ4 282 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 ADGRA2Q96PE1 1338 aa15.1■□□□□ 0.01
CCDC90B-216ENST00000529856 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 USP14P54578 494 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 PABPC4Q13310 644 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 CTU1Q7Z7A3 348 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 ERO1AQ96HE7 468 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 C12orf42Q96LP6 360 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 FEZ1Q99689 392 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 KANSL2Q9H9L4 492 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 CPA4Q9UI42 421 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 ANAPC4Q9UJX5 808 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 PNMA3Q9UL41 463 aa15.09■□□□□ 0.01
CCDC90B-216ENST00000529856 PRDM1O75626 825 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 OSBPP22059 807 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 CHMLP26374 656 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 PDE4BQ07343 736 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 ZYXQ15942 572 aaKnown RBP15.08■□□□□ 0
CCDC90B-216ENST00000529856 CD99L2Q8TCZ2 262 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 ZMYM6O95789 1325 aa15.08■□□□□ 0
CCDC90B-216ENST00000529856 BCRP11274 1271 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 ICA1Q05084 483 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 CTDSPL2Q05D32 466 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 CLEC10AQ8IUN9 316 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 RUFY2Q8WXA3 655 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 MCOLN1Q9GZU1 580 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 ASCC2Q9H1I8 757 aaPredicted RBP15.07■□□□□ 0
CCDC90B-216ENST00000529856 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.07■□□□□ 0
CCDC90B-216ENST00000529856 TMX2Q9Y320 296 aa15.07■□□□□ 0
CCDC90B-216ENST00000529856 GREB1LQ9C091 1923 aaPredicted RBP15.06■□□□□ 0
CCDC90B-216ENST00000529856 IGKV6D-41A0A0C4DH26 115 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 FGRP09769 529 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
CCDC90B-216ENST00000529856 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
CCDC90B-216ENST00000529856 CAP1Q01518 475 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 PKN2Q16513 984 aaKnown RBP15.06■□□□□ 0
CCDC90B-216ENST00000529856 SMCR8Q8TEV9 937 aaPredicted RBP15.06■□□□□ 0
CCDC90B-216ENST00000529856 DSCC1Q9BVC3 393 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 IL25Q9H293 177 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 INCENPQ9NQS7 918 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 TACC3Q9Y6A5 838 aa15.06■□□□□ 0
CCDC90B-216ENST00000529856 USP17L15C9J2P7 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L13C9JLJ4 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L11C9JVI0 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L18D6R9N7 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L22D6RA61 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L17D6RBQ6 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L19D6RCP7 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L20D6RJB6 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 VCAM1P19320 739 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 GCLCP48506 637 aaPredicted RBP15.05■□□□□ -0
CCDC90B-216ENST00000529856 IRX3P78415 501 aaPredicted RBP15.05■□□□□ -0
CCDC90B-216ENST00000529856 TFAP4Q01664 338 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 USP17L24Q0WX57 530 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 ARHGEF6Q15052 776 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 FAM47AQ5JRC9 791 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 OTOP1Q7RTM1 612 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 NEDD1Q8NHV4 660 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 P2RX7Q99572 595 aaKnown RBP15.05■□□□□ -0
CCDC90B-216ENST00000529856 SH2D4AQ9H788 454 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 EFCC1Q9HA90 598 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 NYAP2Q9P242 653 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 RAD50Q92878 1312 aa15.05■□□□□ -0
CCDC90B-216ENST00000529856 ORC4O43929 436 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 ATP2B2Q01814 1243 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 KIF22Q14807 665 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 BMP2KLQ5H9B9 411 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 KIAA1755Q5JYT7 1200 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 ANKRD13CQ8N6S4 541 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 VCPKMTQ9H867 229 aa15.04■□□□□ -0
CCDC90B-216ENST00000529856 TRIM17Q9Y577 477 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms