RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
CD44-228ENST00000528455 EPHX2P34913 555 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 ADD2P35612 726 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 GSTO1P78417 241 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 HDLBPQ00341 1268 aaKnown RBP8.89□□□□□ -0.99
CD44-228ENST00000528455 TNIP1Q15025 636 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 EAPPQ56P03 285 aaPredicted RBP8.89□□□□□ -0.99
CD44-228ENST00000528455 ZMYM1Q5SVZ6 1142 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 DACT2Q5SW24 774 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 LDHDQ86WU2 507 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 ALG2Q9H553 416 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 DBNDD1Q9H9R9 158 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 PIH1D3Q9NQM4 214 aaKnown RBP8.89□□□□□ -0.99
CD44-228ENST00000528455 KCNQ5Q9NR82 932 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 PCDHB9Q9Y5E1 797 aa8.89□□□□□ -0.99
CD44-228ENST00000528455 MYH7P12883 1935 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 MYO3BQ8WXR4 1341 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 TCRBV5S4A2TA0A5A2 114 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 YDJCA8MPS7 323 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 TNFRSF10AO00220 468 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 IDH1O75874 414 aaKnown RBP8.88□□□□□ -0.99
CD44-228ENST00000528455 SOX11P35716 441 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 MFAP1P55081 439 aaKnown RBP8.88□□□□□ -0.99
CD44-228ENST00000528455 HTRA3P83110 453 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 PRR20EP86478 221 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 PRR20CP86479 221 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 PRR20DP86480 221 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 PRR20BP86481 221 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 PRR20AP86496 221 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 CXCL9Q07325 125 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 CHAF1AQ13111 956 aaPredicted RBP8.88□□□□□ -0.99
CD44-228ENST00000528455 C8orf34Q49A92 452 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 MFSD14BQ5SR56 506 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 AGBL3Q8NEM8 1001 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 NSUN4Q96CB9 384 aaKnown RBP8.88□□□□□ -0.99
CD44-228ENST00000528455 CDK15Q96Q40 435 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 DIAPH3Q9NSV4 1193 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 RAI14Q9P0K7 980 aa8.88□□□□□ -0.99
CD44-228ENST00000528455 SGSM2O43147 1006 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 PDE6AP16499 860 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
CD44-228ENST00000528455 MECOMQ03112 1051 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 CIAPIN1Q6FI81 312 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 NAA16Q6N069 864 aaPredicted RBP8.87□□□□□ -0.99
CD44-228ENST00000528455 HHIPL2Q6UWX4 724 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 CWC27Q6UX04 472 aaKnown RBP8.87□□□□□ -0.99
CD44-228ENST00000528455 MAGEB6Q8N7X4 407 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 APPBP2Q92624 585 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 DPF2Q92785 391 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 SLC10A4Q96EP9 437 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 PSME4Q14997 1843 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 DOCK2Q92608 1830 aa8.87□□□□□ -0.99
CD44-228ENST00000528455 MAST3O60307 1309 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 ZNF532Q9HCE3 1301 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 COL4A5P29400 1685 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 REC8O95072 547 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 BAG3O95817 575 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 CYP7A1P22680 504 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 RPS12P25398 132 aaKnown RBP8.86□□□□□ -0.99
CD44-228ENST00000528455 PRDX5P30044 214 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 EPS15P42566 896 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 SCNN1DP51172 638 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 NMIQ13287 307 aaPredicted RBP8.86□□□□□ -0.99
CD44-228ENST00000528455 KIAA1211Q6ZU35 1233 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 USP50Q70EL3 339 aaPredicted RBP8.86□□□□□ -0.99
CD44-228ENST00000528455 OGFOD1Q8N543 542 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 CERS5Q8N5B7 392 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 OSBP2Q969R2 916 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 GMLQ99445 158 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 TOR4AQ9NXH8 423 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 MAP4K5Q9Y4K4 846 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 SCN9AQ15858 1988 aa8.86□□□□□ -0.99
CD44-228ENST00000528455 RAD50Q92878 1312 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 GPR75-ASB3A0A0A6YYF3 556 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 PATL2C9JE40 543 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 PSMD14O00487 310 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 RAD17O75943 681 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 GNAT2P19087 354 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 SEMA3FQ13275 785 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 DZIP1Q86YF9 867 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 ZNF384Q8TF68 577 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 MAP4K1Q92918 833 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 GLMNQ92990 594 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 FAM227BQ96M60 508 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 STRBPQ96SI9 672 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 USP26Q9BXU7 913 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 PUS7LQ9H0K6 701 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 ADARB2Q9NS39 739 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 SERPINA10Q9UK55 444 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 TTF2Q9UNY4 1162 aaKnown RBP8.85□□□□□ -0.99
CD44-228ENST00000528455 MYH2Q9UKX2 1941 aa8.85□□□□□ -0.99
CD44-228ENST00000528455 PCNTO95613 3336 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms