RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
CCDC84-205ENST00000528088 SAP30BPQ9UHR5 308 aaKnown RBP13.2□□□□□ -0.3
CCDC84-205ENST00000528088 APPP05067 770 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 HOXB3P14651 431 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-205ENST00000528088 DCAF15Q66K64 600 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 ZFPM1Q8IX07 1006 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 ANKRD13AQ8IZ07 590 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC84-205ENST00000528088 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-205ENST00000528088 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
CCDC84-205ENST00000528088 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-205ENST00000528088 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 M0R2C6 588 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 HIP1O00291 1037 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 IGF2BP3O00425 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 GPAA1O43292 621 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 GSPT1P15170 499 aaKnown RBP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 PRSS12P56730 875 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 SREBF2Q12772 1141 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 VGLL4Q14135 290 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 ZNF296Q8WUU4 475 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-205ENST00000528088 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
CCDC84-205ENST00000528088 MANSC4A6NHS7 340 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-205ENST00000528088 TRAK2O60296 914 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 ZBTB48P10074 688 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-205ENST00000528088 SDSP20132 328 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-205ENST00000528088 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 SEC62Q99442 399 aaKnown RBP13.17□□□□□ -0.3
CCDC84-205ENST00000528088 PTPN18Q99952 460 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 MCM9Q9NXL9 1143 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 MYH8P13535 1937 aa13.17□□□□□ -0.3
CCDC84-205ENST00000528088 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-205ENST00000528088 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 GPR25O00155 361 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 PRKAB2O43741 272 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
CCDC84-205ENST00000528088 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-205ENST00000528088 FAM227BQ96M60 508 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 ZNF341Q9BYN7 854 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 DHX36Q9H2U1 1008 aaKnown RBP13.16□□□□□ -0.3
CCDC84-205ENST00000528088 OTOFQ9HC10 1997 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 GNAT2P19087 354 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 TDO2P48775 406 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 POTEHQ6S545 545 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 CSADQ9Y600 493 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 SNCAIPQ9Y6H5 919 aa13.16□□□□□ -0.3
CCDC84-205ENST00000528088 COL2A1P02458 1487 aaPredicted RBP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 FAM196BA6NMK8 535 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 INPP5BP32019 993 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 MFAP1P55081 439 aaKnown RBP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 CTU1Q7Z7A3 348 aaKnown RBP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 STRBPQ96SI9 672 aaKnown RBP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 CFHR5Q9BXR6 569 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 DCP1AQ9NPI6 582 aaPredicted RBP13.15□□□□□ -0.3
CCDC84-205ENST00000528088 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
CCDC84-205ENST00000528088 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.31
CCDC84-205ENST00000528088 INHBEP58166 350 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 TBC1D2Q9BYX2 928 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 NAPBQ9H115 298 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 LAMB1P07942 1786 aa13.14□□□□□ -0.31
CCDC84-205ENST00000528088 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
CCDC84-205ENST00000528088 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 CLK2P49760 499 aaKnown RBP13.13□□□□□ -0.31
CCDC84-205ENST00000528088 BMP2KLQ5H9B9 411 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 CASC1Q6TDU7 716 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
CCDC84-205ENST00000528088 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
CCDC84-205ENST00000528088 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
CCDC84-205ENST00000528088 FKTNO75072 461 aa13.12□□□□□ -0.31
CCDC84-205ENST00000528088 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
CCDC84-205ENST00000528088 CAP1Q01518 475 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms