RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 CCDC30Q5VVM6 783 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 C17orf99Q6UX52 265 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 G2E3Q7L622 706 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 CPA4Q9UI42 421 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 TTF2Q9UNY4 1162 aaKnown RBP10.3□□□□□ -0.76
USP48-212ENST00000527823 RIPOR2Q9Y4F9 1068 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 PRUNE2Q8WUY3 3088 aa10.3□□□□□ -0.76
USP48-212ENST00000527823 AK9Q5TCS8 1911 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 FRMPD3Q5JV73 1810 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 SIAH2O43255 324 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 RGS20O76081 388 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 CETPP11597 493 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 PSMC4P43686 418 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 CACNB3P54284 484 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 GNAI1P63096 354 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 PRKCZQ05513 592 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 PPIL2Q13356 520 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 RALBP1Q15311 655 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 GRIK5Q16478 980 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 ERO1BQ86YB8 467 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
USP48-212ENST00000527823 U2AF1L4Q8WU68 220 aaKnown RBP10.29□□□□□ -0.76
USP48-212ENST00000527823 GLMNQ92990 594 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 WRNIP1Q96S55 665 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
USP48-212ENST00000527823 ANKRD18BA2A2Z9 1011 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 GDF9O60383 454 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 CRKP46108 304 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 SNAPC2Q13487 334 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 WDR43Q15061 677 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP48-212ENST00000527823 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 TRMT44Q8IYL2 757 aaKnown RBP10.28□□□□□ -0.76
USP48-212ENST00000527823 RAET1EQ8TD07 263 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
USP48-212ENST00000527823 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 ALG2Q9H553 416 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 NR2E3Q9Y5X4 410 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 LOC285556D6RIA3 1793 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 MAST2Q6P0Q8 1798 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 MUC3AQ02505 3323 aa10.28□□□□□ -0.76
USP48-212ENST00000527823 WDHD1O75717 1129 aaPredicted RBP10.27□□□□□ -0.77
USP48-212ENST00000527823 MOGSQ13724 837 aa10.27□□□□□ -0.77
USP48-212ENST00000527823 Q7L0L9 218 aa10.27□□□□□ -0.77
USP48-212ENST00000527823 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
USP48-212ENST00000527823 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
USP48-212ENST00000527823 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
USP48-212ENST00000527823 PLXNB2O15031 1838 aa10.27□□□□□ -0.77
USP48-212ENST00000527823 ATAD5Q96QE3 1844 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 PDHXO00330 501 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 BCRP11274 1271 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 INPP5BP32019 993 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 SOX11P35716 441 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 GYG1P46976 350 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 TNNI2P48788 182 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 FOXO4P98177 505 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
USP48-212ENST00000527823 ANKRD23Q86SG2 305 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 TSR2Q969E8 191 aaKnown RBP10.26□□□□□ -0.77
USP48-212ENST00000527823 ZNF594Q96JF6 807 aaPredicted RBP10.26□□□□□ -0.77
USP48-212ENST00000527823 C1orf115Q9H7X2 142 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 STAP2Q9UGK3 403 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 GABRQQ9UN88 632 aa10.26□□□□□ -0.77
USP48-212ENST00000527823 COL2A1P02458 1487 aaPredicted RBP10.25□□□□□ -0.77
USP48-212ENST00000527823 APAF1O14727 1248 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 INHAP05111 366 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 UBXN2AP68543 259 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 IFIT5Q13325 482 aaKnown RBP10.25□□□□□ -0.77
USP48-212ENST00000527823 EPHA10Q5JZY3 1008 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 DIS3LQ8TF46 1054 aaKnown RBP10.25□□□□□ -0.77
USP48-212ENST00000527823 GDF15Q99988 308 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
USP48-212ENST00000527823 STK31Q9BXU1 1019 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 MYH16Q9H6N6 1097 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 CEP126Q9P2H0 1117 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
USP48-212ENST00000527823 LTBP2Q14767 1821 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 TTC28Q96AY4 2481 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 TTC24A2A3L6 582 aaPredicted RBP10.24□□□□□ -0.77
USP48-212ENST00000527823 SGPL1O95470 568 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 ELNP15502 786 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 CALD1Q05682 793 aaKnown RBP10.24□□□□□ -0.77
USP48-212ENST00000527823 PPATQ06203 517 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 FAM83AQ86UY5 434 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 CYP4X1Q8N118 509 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 CDK15Q96Q40 435 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 PARK7Q99497 189 aaKnown RBP10.24□□□□□ -0.77
USP48-212ENST00000527823 PAK6Q9NQU5 681 aaPredicted RBP10.24□□□□□ -0.77
USP48-212ENST00000527823 STXBP5LQ9Y2K9 1186 aa10.24□□□□□ -0.77
USP48-212ENST00000527823 DNAH12Q6ZR08 3092 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 PLIN1O60240 522 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 CYP2C8P10632 490 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 HOXD10P28358 340 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 FCGRTP55899 365 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 RAB15P59190 212 aa10.23□□□□□ -0.77
USP48-212ENST00000527823 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms