RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 NOM1Q5C9Z4 860 aaKnown RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 TMTC3Q6ZXV5 915 aa23.31■■□□□ 1.32
SMIM3-201ENST00000526627 CNTNAP4Q9C0A0 1308 aa23.31■■□□□ 1.32
SMIM3-201ENST00000526627 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 TBX2Q13207 712 aaPredicted RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 NOL10Q9BSC4 688 aaKnown RBP23.31■■□□□ 1.32
SMIM3-201ENST00000526627 NFE2L3Q9Y4A8 694 aa23.31■■□□□ 1.32
SMIM3-201ENST00000526627 MYH13Q9UKX3 1938 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 PDS5AQ29RF7 1337 aaKnown RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 NRDCO43847 1150 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 ORC4O43929 436 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 DDAH1O94760 285 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 TOP1P11387 765 aaKnown RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 HSP90AA4PQ58FG1 418 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 KANK3Q6NY19 840 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 TMEM139Q8IV31 216 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 EPSTI1Q96J88 318 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 L2HGDHQ9H9P8 463 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 CNTNAP5Q8WYK1 1306 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 RGL2O15211 777 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 CALM1P0DP23 149 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 CALM2P0DP24 149 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 CALM3P0DP25 149 aa23.3■■□□□ 1.32
SMIM3-201ENST00000526627 RPS8P62241 208 aaKnown RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
SMIM3-201ENST00000526627 LAMB1P07942 1786 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 NMT2O60551 498 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 CBX1P83916 185 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 SYT10Q6XYQ8 523 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 SH3RF1Q7Z6J0 888 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
SMIM3-201ENST00000526627 ZMYND15Q9H091 742 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 TFCP2L1Q9NZI6 479 aa23.29■■□□□ 1.32
SMIM3-201ENST00000526627 ERO1AQ96HE7 468 aa23.28■■□□□ 1.32
SMIM3-201ENST00000526627 DACH1Q9UI36 760 aa23.28■■□□□ 1.32
SMIM3-201ENST00000526627 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
SMIM3-201ENST00000526627 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
SMIM3-201ENST00000526627 SMAP1Q8IYB5 467 aaPredicted RBP23.28■■□□□ 1.32
SMIM3-201ENST00000526627 DHX58Q96C10 678 aa23.28■■□□□ 1.32
SMIM3-201ENST00000526627 CGNQ9P2M7 1197 aaKnown RBP23.28■■□□□ 1.32
SMIM3-201ENST00000526627 COL24A1Q17RW2 1714 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 KIAA1551Q9HCM1 1747 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 CYP2D6P10635 497 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 PRDX5P30044 214 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 CCDC93Q567U6 631 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 SRP68Q9UHB9 627 aaKnown RBP23.27■■□□□ 1.32
SMIM3-201ENST00000526627 SPDYE4A6NLX3 237 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 SLU7O95391 586 aaKnown RBP23.27■■□□□ 1.32
SMIM3-201ENST00000526627 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
SMIM3-201ENST00000526627 PLCD1P51178 756 aa23.27■■□□□ 1.32
SMIM3-201ENST00000526627 SYMPKQ92797 1274 aaKnown RBP23.27■■□□□ 1.32
SMIM3-201ENST00000526627 FAM47AQ5JRC9 791 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 REXO1L1PQ8IX06 675 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 SAMSN1Q9NSI8 373 aaKnown RBP23.26■■□□□ 1.31
SMIM3-201ENST00000526627 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.26■■□□□ 1.31
SMIM3-201ENST00000526627 V9GYY5 206 aaPredicted RBP23.26■■□□□ 1.31
SMIM3-201ENST00000526627 SLFN14P0C7P3 912 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 TRIM65Q6PJ69 517 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 FERMT2Q96AC1 680 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 PAGE5Q96GU1 130 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 CRNKL1Q9BZJ0 848 aaKnown RBP23.26■■□□□ 1.31
SMIM3-201ENST00000526627 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
SMIM3-201ENST00000526627 TUBB4AP04350 444 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 ERCC5P28715 1186 aaPredicted RBP23.25■■□□□ 1.31
SMIM3-201ENST00000526627 ZNF174Q15697 407 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 ATP8A2Q9NTI2 1148 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 IRS2Q9Y4H2 1338 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 MAST2Q6P0Q8 1798 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 ETF1P62495 437 aaKnown RBP23.25■■□□□ 1.31
SMIM3-201ENST00000526627 FAM98CQ17RN3 349 aaKnown RBP23.25■■□□□ 1.31
SMIM3-201ENST00000526627 SBK1Q52WX2 424 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 TXNRD3Q86VQ6 643 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 NLRP3Q96P20 1036 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 NYXQ9GZU5 481 aa23.25■■□□□ 1.31
SMIM3-201ENST00000526627 ADAMTS3O15072 1205 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 FANCGO15287 622 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 CCP110O43303 1012 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 BMP15O95972 392 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 VEGFAP15692 232 aaPredicted RBP23.24■■□□□ 1.31
SMIM3-201ENST00000526627 CASP1P29466 404 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 TTC38Q5R3I4 469 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 FCHSD1Q86WN1 690 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 FEZ1Q99689 392 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 ANKRD2Q9GZV1 360 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 CD44P16070 742 aaKnown RBP23.24■■□□□ 1.31
SMIM3-201ENST00000526627 AFMP43652 599 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 RCSD1Q6JBY9 416 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 TC2NQ8N9U0 490 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 LRRN4CLQ8ND94 238 aa23.24■■□□□ 1.31
SMIM3-201ENST00000526627 CDK11BP21127 795 aaKnown RBP23.23■■□□□ 1.31
SMIM3-201ENST00000526627 TM4SF1P30408 202 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 ATP2C1P98194 919 aaPredicted RBP23.23■■□□□ 1.31
SMIM3-201ENST00000526627 DPYDQ12882 1025 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 CUL4BQ13620 913 aa23.23■■□□□ 1.31
SMIM3-201ENST00000526627 NR1I3Q14994 352 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms