RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 FBF1Q8TES7 1133 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 CCDC114Q96M63 670 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 NUP58Q9BVL2 599 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 SUPT20HL1Q3ZLR7 823 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 CCDC122Q5T0U0 273 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 MRPL44Q9H9J2 332 aaKnown RBP18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 GCNT3O95395 438 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 YWHAEP62258 255 aaKnown RBP18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 PSTPIP2Q9H939 334 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 HAUS2Q9NVX0 235 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 AATKQ6ZMQ8 1374 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 ZBTB8OSQ8IWT0 167 aa18.09■□□□□ 0.49
PCDHA3-201ENST00000522353 NR1I2O75469 434 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 CD19P15391 556 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 ERCC5P28715 1186 aaPredicted RBP18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 MCM6Q14566 821 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 CFAP58Q5T655 872 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 CEP128Q6ZU80 1094 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 PNMA1Q8ND90 353 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 LZTFL1Q9NQ48 299 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 FLOT1O75955 427 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 BEND3Q5T5X7 828 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 FBXO11Q86XK2 927 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 TRPC6Q9Y210 931 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
PCDHA3-201ENST00000522353 ZBTB24O43167 697 aaPredicted RBP18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 STK10O94804 968 aaKnown RBP18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 ZNF569Q5MCW4 686 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 TPH2Q8IWU9 490 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 H0YCG3 227 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 KRT19P08727 400 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 BCRP11274 1271 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 ASIC2Q16515 512 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 CCDC125Q86Z20 511 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 UNC5CLQ8IV45 518 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 IGSF22Q8N9C0 903 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 VPS16Q9H269 839 aa18.08■□□□□ 0.48
PCDHA3-201ENST00000522353 METP08581 1390 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 PRPF6O94906 941 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 ABCB5Q2M3G0 1257 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 DYMQ7RTS9 669 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 RNF123Q5XPI4 1314 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 E7EVH7 732 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 GALNT17Q6IS24 598 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 BAG1Q99933 345 aaPredicted RBP18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 KCNJ14Q9UNX9 436 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 CNGA1P29973 690 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 HSPA4P34932 840 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 KRT26Q7Z3Y9 468 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 GPR161Q8N6U8 529 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 CCDC26Q8TAB7 109 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 THRAP3Q9Y2W1 955 aaKnown RBP18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 SLFN13Q68D06 897 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 ARFGAP2Q8N6H7 521 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 GREM2Q9H772 168 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
PCDHA3-201ENST00000522353 BLMP54132 1417 aaPredicted RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 KCTD2Q14681 263 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 KARSQ15046 597 aaKnown RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 EAF2Q96CJ1 260 aaPredicted RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 HAUS7Q99871 368 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 ADPGKQ9BRR6 497 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 MAPK8IP1Q9UQF2 711 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 SLC9C1Q4G0N8 1177 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 CCDC84Q86UT8 332 aaPredicted RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 DCUN1D2Q6PH85 259 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 CAPZA3Q96KX2 299 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 KLRF2D3W0D1 207 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 METTL13Q8N6R0 699 aa18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 ZNF274Q96GC6 653 aaPredicted RBP18.06■□□□□ 0.48
PCDHA3-201ENST00000522353 ABCC4O15439 1325 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 CIAO1O76071 339 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 CCDC93Q567U6 631 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 SLFN12Q8IYM2 578 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 NBPF3Q9H094 633 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 FOSP01100 380 aaPredicted RBP18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 BLIDQ8IZY5 108 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 SDR42E1Q8WUS8 393 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 ODF2LQ9ULJ1 636 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 IVLP07476 585 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 TMOD1P28289 359 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 MXRA7P84157 204 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 UBL4BQ8N7F7 174 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 TNKSO95271 1327 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 FANCBQ8NB91 859 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 GPR108Q9NPR9 543 aa18.05■□□□□ 0.48
PCDHA3-201ENST00000522353 MYOM2P54296 1465 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms