RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 FAM193AP78312 1265 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 KCNB2Q92953 911 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 GOLPH3LQ9H4A5 285 aa12.73□□□□□ -0.37
PCDHGB4-201ENST00000519479 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 CNGA4Q8IV77 575 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 KIF20AO95235 890 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 MEGF6O75095 1541 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 FOXP1Q9H334 677 aaPredicted RBP12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 DNA2P51530 1060 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 CUL5Q93034 780 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
PCDHGB4-201ENST00000519479 NEDD4P46934 1319 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 AKR1B10O60218 316 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 CDC25BP30305 580 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 EIF6P56537 245 aaKnown RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 FAM182BQ5T319 152 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 KRT79Q5XKE5 535 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 MMP1P03956 469 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 ARID4AP29374 1257 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 PLCD1P51178 756 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 SKIDA1Q1XH10 827 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 SPECC1LQ69YQ0 1117 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 RNF26Q9BY78 433 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
PCDHGB4-201ENST00000519479 CYLC1P35663 651 aaPredicted RBP12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 AK9Q5TCS8 1911 aa12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 PNMA1Q8ND90 353 aa12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 JADE2Q9NQC1 790 aa12.71□□□□□ -0.38
PCDHGB4-201ENST00000519479 ZNF804BA4D1E1 1349 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTAGE9A4FU28 777 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 SCG2P13521 617 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 PAK1Q13153 545 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 ARFGAP3Q9NP61 516 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 SEPT11Q9NVA2 429 aaKnown RBP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 MYO1BO43795 1136 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 U2AF2P26368 475 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 SYCP1Q15431 976 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 ELF2Q15723 593 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 CSRNP2Q9H175 543 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 BICDL2A1A5D9 508 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 PPP1R12BO60237 982 aaPredicted RBP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 CCNT1O60563 726 aaKnown RBP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 CSF1RP07333 972 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 PTGDRQ13258 359 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 TCERG1LQ5VWI1 586 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 MMRN2Q9H8L6 949 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 HDAC9Q9UKV0 1011 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
PCDHGB4-201ENST00000519479 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 FMR1NBQ8N0W7 255 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 TAF4BQ92750 862 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 MON2Q7Z3U7 1717 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTAGE15A4D2H0 777 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 DDAH1O94760 285 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTAGE8P0CG41 777 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 CDC27P30260 824 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTAGE6Q86UF2 777 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 CTAGE4Q8IX94 777 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 TRERF1Q96PN7 1200 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 NARFQ9UHQ1 456 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 PCP11498 1178 aaKnown RBP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 LONRF3Q496Y0 759 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 BLIDQ8IZY5 108 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 TAB2Q9NYJ8 693 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 SETD1AO15047 1707 aaKnown RBP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 PDE4DQ08499 809 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 FEZ1Q99689 392 aa12.69□□□□□ -0.38
PCDHGB4-201ENST00000519479 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 IKBKBO14920 756 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 TXKP42681 527 aa12.68□□□□□ -0.38
PCDHGB4-201ENST00000519479 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms