RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
SDC2-202ENST00000518385 DBNDD1Q9H9R9 158 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 TOMM22Q9NS69 142 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 SUGT1Q9Y2Z0 365 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 TACC3Q9Y6A5 838 aa21.05■□□□□ 0.96
SDC2-202ENST00000518385 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
SDC2-202ENST00000518385 MYO1BO43795 1136 aa21.04■□□□□ 0.96
SDC2-202ENST00000518385 CTR9Q6PD62 1173 aa21.04■□□□□ 0.96
SDC2-202ENST00000518385 CCAR1Q8IX12 1150 aaKnown RBP21.04■□□□□ 0.96
SDC2-202ENST00000518385 DCP1AQ9NPI6 582 aaPredicted RBP21.04■□□□□ 0.96
SDC2-202ENST00000518385 ECE2O60344 883 aa21.03■□□□□ 0.96
SDC2-202ENST00000518385 LRMPQ12912 555 aa21.03■□□□□ 0.96
SDC2-202ENST00000518385 RRP12Q5JTH9 1297 aaKnown RBP21.03■□□□□ 0.96
SDC2-202ENST00000518385 ENGASEQ8NFI3 743 aa21.03■□□□□ 0.96
SDC2-202ENST00000518385 AATFQ9NY61 560 aaKnown RBP eCLIP21.03■□□□□ 0.96
SDC2-202ENST00000518385 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 IFNAR1P17181 557 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 U2AF2P26368 475 aaKnown RBP eCLIP21.02■□□□□ 0.962e-6■■■■□ 19.7
SDC2-202ENST00000518385 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
SDC2-202ENST00000518385 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.96
SDC2-202ENST00000518385 NTRK3Q16288 839 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 TPRNQ4KMQ1 711 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 FAM173BQ6P4H8 233 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 IQCA1Q86XH1 822 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 NKX2-3Q8TAU0 364 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 INCENPQ9NQS7 918 aa21.02■□□□□ 0.96
SDC2-202ENST00000518385 USP17L12C9JPN9 530 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 USP17L21D6R901 530 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 FKBP1AP62942 108 aaKnown RBP21.02■□□□□ 0.95
SDC2-202ENST00000518385 STRIP1Q5VSL9 837 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 MICU3Q86XE3 530 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 KRT222Q8N1A0 295 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 FAM163AQ96GL9 167 aaPredicted RBP21.02■□□□□ 0.95
SDC2-202ENST00000518385 PRDM10Q9NQV6 1147 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 KCNQ5Q9NR82 932 aa21.02■□□□□ 0.95
SDC2-202ENST00000518385 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.02■□□□□ 0.95
SDC2-202ENST00000518385 SKILP12757 684 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 PLCG2P16885 1265 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 PDE4BQ07343 736 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 SSRP1Q08945 709 aaKnown RBP21.01■□□□□ 0.95
SDC2-202ENST00000518385 SEC23AQ15436 765 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 CERS5Q8N5B7 392 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 FBXW7Q969H0 707 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 FAM217BQ9NTX9 383 aaPredicted RBP21.01■□□□□ 0.95
SDC2-202ENST00000518385 RTEL1Q9NZ71 1219 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 NRBP1Q9UHY1 535 aa21.01■□□□□ 0.95
SDC2-202ENST00000518385 SLU7O95391 586 aaKnown RBP21■□□□□ 0.95
SDC2-202ENST00000518385 YEATS4O95619 227 aa21■□□□□ 0.95
SDC2-202ENST00000518385 CALM1P0DP23 149 aa21■□□□□ 0.95
SDC2-202ENST00000518385 CALM2P0DP24 149 aa21■□□□□ 0.95
SDC2-202ENST00000518385 CALM3P0DP25 149 aa21■□□□□ 0.95
SDC2-202ENST00000518385 CDC27P30260 824 aa21■□□□□ 0.95
SDC2-202ENST00000518385 RTN1Q16799 776 aa21■□□□□ 0.95
SDC2-202ENST00000518385 ADALQ6DHV7 355 aa21■□□□□ 0.95
SDC2-202ENST00000518385 AMOTL1Q8IY63 956 aa21■□□□□ 0.95
SDC2-202ENST00000518385 CCAR2Q8N163 923 aaKnown RBP21■□□□□ 0.95
SDC2-202ENST00000518385 KCNG4Q8TDN1 519 aa21■□□□□ 0.95
SDC2-202ENST00000518385 MRPS27Q92552 414 aaKnown RBP21■□□□□ 0.95
SDC2-202ENST00000518385 ZSCAN10Q96SZ4 725 aaPredicted RBP21■□□□□ 0.95
SDC2-202ENST00000518385 ALG1Q9BT22 464 aa21■□□□□ 0.95
SDC2-202ENST00000518385 FAM53CQ9NYF3 392 aa21■□□□□ 0.95
SDC2-202ENST00000518385 LAMB1P07942 1786 aa21■□□□□ 0.95
SDC2-202ENST00000518385 USP17L3A6NCW0 530 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 USP17L4A6NCW7 530 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 FMNL1O95466 1100 aaPredicted RBP20.99■□□□□ 0.95
SDC2-202ENST00000518385 CCZ1BP86790 482 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 CCZ1P86791 482 aaPredicted RBP20.99■□□□□ 0.95
SDC2-202ENST00000518385 DIXDC1Q155Q3 683 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 ZRSR1Q15695 479 aaKnown RBP20.99■□□□□ 0.95
SDC2-202ENST00000518385 CCDC144BQ3MJ40 725 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 CCDC178Q5BJE1 867 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 USP17L1Q7RTZ2 530 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 CCDC144CPQ8IYA2 1237 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 TRIM22Q8IYM9 498 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 NLGN2Q8NFZ4 835 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 SENP2Q9HC62 589 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 ZNF277Q9NRM2 450 aaPredicted RBP20.99■□□□□ 0.95
SDC2-202ENST00000518385 MKRN1Q9UHC7 482 aaKnown RBP20.99■□□□□ 0.95
SDC2-202ENST00000518385 MROH7-TTC4A0A0A0MT08 1334 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 TNKSO95271 1327 aa20.99■□□□□ 0.95
SDC2-202ENST00000518385 SNW1Q13573 536 aaKnown RBP20.98■□□□□ 0.95
SDC2-202ENST00000518385 TRIM29Q14134 588 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 DACT2Q5SW24 774 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 DHX40Q8IX18 779 aaKnown RBP20.98■□□□□ 0.95
SDC2-202ENST00000518385 ZNF654Q8IZM8 581 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 ARID3AQ99856 593 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 BAZ2AQ9UIF9 1905 aaKnown RBP20.98■□□□□ 0.95
SDC2-202ENST00000518385 MYH2Q9UKX2 1941 aa20.98■□□□□ 0.95
SDC2-202ENST00000518385 GPR75-ASB3A0A0A6YYF3 556 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 LARGE2Q8N3Y3 721 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 FANCBQ8NB91 859 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 MXD3Q9BW11 206 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 SRRTQ9BXP5 876 aaKnown RBP20.97■□□□□ 0.95
SDC2-202ENST00000518385 L2HGDHQ9H9P8 463 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 RBM28Q9NW13 759 aaKnown RBP20.97■□□□□ 0.95
SDC2-202ENST00000518385 GAKO14976 1311 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 SCN9AQ15858 1988 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
SDC2-202ENST00000518385 USP5P45974 858 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms