RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 OSBPL3Q9H4L5 887 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 PTCH2Q9Y6C5 1203 aa29.53■■■□□ 2.32
PVT1-204ENST00000517525 CYP2D7A0A087X1C5 515 aa29.52■■■□□ 2.32
PVT1-204ENST00000517525 SEPT2Q15019 361 aa29.52■■■□□ 2.32
PVT1-204ENST00000517525 MORF4L1Q9UBU8 362 aa29.52■■■□□ 2.32
PVT1-204ENST00000517525 PATL2C9JE40 543 aaKnown RBP29.51■■■□□ 2.31
PVT1-204ENST00000517525 FMNL1O95466 1100 aaPredicted RBP29.51■■■□□ 2.31
PVT1-204ENST00000517525 ACER1Q8TDN7 264 aa29.51■■■□□ 2.31
PVT1-204ENST00000517525 GTF3C2Q8WUA4 911 aaPredicted RBP29.51■■■□□ 2.31
PVT1-204ENST00000517525 IRX3P78415 501 aaPredicted RBP29.5■■■□□ 2.31
PVT1-204ENST00000517525 ANKRD13CQ8N6S4 541 aa29.5■■■□□ 2.31
PVT1-204ENST00000517525 P2RX7Q99572 595 aaKnown RBP29.5■■■□□ 2.31
PVT1-204ENST00000517525 ROBO3Q96MS0 1386 aa29.5■■■□□ 2.31
PVT1-204ENST00000517525 BAZ2AQ9UIF9 1905 aaKnown RBP29.49■■■□□ 2.31
PVT1-204ENST00000517525 SMIM22K7EJ46 135 aa29.49■■■□□ 2.31
PVT1-204ENST00000517525 NBPF11Q86T75 865 aa29.49■■■□□ 2.31
PVT1-204ENST00000517525 FEZ1Q99689 392 aa29.49■■■□□ 2.31
PVT1-204ENST00000517525 EPB41L4AQ9HCS5 686 aaPredicted RBP29.49■■■□□ 2.31
PVT1-204ENST00000517525 AKR1B1P15121 316 aa29.48■■■□□ 2.31
PVT1-204ENST00000517525 ZNF333Q96JL9 665 aa29.48■■■□□ 2.31
PVT1-204ENST00000517525 USP17L15C9J2P7 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L13C9JLJ4 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L11C9JVI0 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L18D6R9N7 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L22D6RA61 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L17D6RBQ6 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L19D6RCP7 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L20D6RJB6 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 MPHOSPH10O00566 681 aaKnown RBP29.47■■■□□ 2.31
PVT1-204ENST00000517525 SOX10P56693 466 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 HERVK_113P62684 666 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 USP17L24Q0WX57 530 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 SLC9C1Q4G0N8 1177 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 B4GALNT3Q6L9W6 998 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 SIAH1Q8IUQ4 282 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 PLEKHM2Q8IWE5 1019 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 IFNL3Q8IZI9 196 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 SEC62Q99442 399 aaKnown RBP29.47■■■□□ 2.31
PVT1-204ENST00000517525 NACAP1Q9BZK3 213 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 HTTP42858 3142 aa29.47■■■□□ 2.31
PVT1-204ENST00000517525 A0A1W2PRG0 241 aa29.46■■■□□ 2.31
PVT1-204ENST00000517525 CATSPERGQ6ZRH7 1159 aa29.46■■■□□ 2.31
PVT1-204ENST00000517525 MYPNQ86TC9 1320 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 ZSWIM8A7E2V4 1837 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 VCAM1P19320 739 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 MLLT1Q03111 559 aaPredicted RBP29.45■■■□□ 2.31
PVT1-204ENST00000517525 LBX2Q6XYB7 198 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 HELLSQ9NRZ9 838 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 TMX2Q9Y320 296 aa29.45■■■□□ 2.31
PVT1-204ENST00000517525 IRF5Q13568 498 aa29.44■■■□□ 2.3
PVT1-204ENST00000517525 KANSL2Q9H9L4 492 aa29.44■■■□□ 2.3
PVT1-204ENST00000517525 RBPJLQ9UBG7 517 aa29.44■■■□□ 2.3
PVT1-204ENST00000517525 TNPO2O14787 897 aaKnown RBP29.43■■■□□ 2.3
PVT1-204ENST00000517525 TDO2P48775 406 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 PRKCZQ05513 592 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 LPAR1Q92633 364 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 SH2D4AQ9H788 454 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 ZNF287Q9HBT7 754 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 ARHGEF10LQ9HCE6 1279 aa29.43■■■□□ 2.3
PVT1-204ENST00000517525 APPP05067 770 aa29.42■■■□□ 2.3
PVT1-204ENST00000517525 ICA1Q05084 483 aa29.42■■■□□ 2.3
PVT1-204ENST00000517525 ZYXQ15942 572 aaKnown RBP29.42■■■□□ 2.3
PVT1-204ENST00000517525 GPRC5AQ8NFJ5 357 aa29.42■■■□□ 2.3
PVT1-204ENST00000517525 RAET1EQ8TD07 263 aa29.42■■■□□ 2.3
PVT1-204ENST00000517525 COA7Q96BR5 231 aa29.42■■■□□ 2.3
PVT1-204ENST00000517525 MINDY4BA8MYZ0 360 aa29.41■■■□□ 2.3
PVT1-204ENST00000517525 RASA1P20936 1047 aa29.41■■■□□ 2.3
PVT1-204ENST00000517525 POTEEQ6S8J3 1075 aa29.41■■■□□ 2.3
PVT1-204ENST00000517525 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.41■■■□□ 2.3
PVT1-204ENST00000517525 TXNRD2Q9NNW7 524 aa29.41■■■□□ 2.3
PVT1-204ENST00000517525 RABGAP1Q9Y3P9 1069 aa29.41■■■□□ 2.3
PVT1-204ENST00000517525 FOXP2O15409 715 aa29.4■■■□□ 2.3
PVT1-204ENST00000517525 GRK4P32298 578 aa29.4■■■□□ 2.3
PVT1-204ENST00000517525 PXYLP1Q8TE99 480 aa29.4■■■□□ 2.3
PVT1-204ENST00000517525 GABRQQ9UN88 632 aa29.4■■■□□ 2.3
PVT1-204ENST00000517525 MGAMO43451 1857 aa29.4■■■□□ 2.3
PVT1-204ENST00000517525 FLT3LGP49771 235 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 ALX1Q15699 326 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 SLAIN1Q8ND83 568 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 NAPBQ9H115 298 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 RPAP3Q9H6T3 665 aaPredicted RBP29.39■■■□□ 2.3
PVT1-204ENST00000517525 VCPKMTQ9H867 229 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 MKNK2Q9HBH9 465 aa29.39■■■□□ 2.3
PVT1-204ENST00000517525 KIAA0100Q14667 2235 aaKnown RBP29.39■■■□□ 2.29
PVT1-204ENST00000517525 ECM2O94769 699 aaPredicted RBP29.38■■■□□ 2.29
PVT1-204ENST00000517525 ERVK-9P63128 1117 aa29.38■■■□□ 2.29
PVT1-204ENST00000517525 ERVK-24P63145 666 aa29.38■■■□□ 2.29
PVT1-204ENST00000517525 MCMDC2Q4G0Z9 681 aa29.38■■■□□ 2.29
PVT1-204ENST00000517525 SH3TC2Q8TF17 1288 aa29.38■■■□□ 2.29
PVT1-204ENST00000517525 GJD2Q9UKL4 321 aa29.38■■■□□ 2.29
PVT1-204ENST00000517525 HOXC10Q9NYD6 342 aa29.37■■■□□ 2.29
PVT1-204ENST00000517525 MYH8P13535 1937 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 IGKV6D-41A0A0C4DH26 115 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 TRIM6-TRIM34B2RNG4 842 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 SLC3A2P08195 630 aaKnown RBP29.36■■■□□ 2.29
PVT1-204ENST00000517525 EEF2P13639 858 aaKnown RBP29.36■■■□□ 2.29
PVT1-204ENST00000517525 MAPK4P31152 587 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 COG2Q14746 738 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 Q3C1V9 767 aa29.36■■■□□ 2.29
PVT1-204ENST00000517525 KIAA1755Q5JYT7 1200 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms