RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 TRIM75PA6NK02 468 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 NTSR2O95665 410 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 XBP1P17861 261 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 GOLGA8FQ08AF8 430 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 GOLGA8DPQ0D2H9 430 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 DPYDQ12882 1025 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 SPATA1Q5VX52 437 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 INTS5Q6P9B9 1019 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 TMED8Q6PL24 325 aaPredicted RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 TOGARAM2Q6ZUX3 1019 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 MNS1Q8NEH6 495 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 WDR24Q96S15 920 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 ZKSCAN3Q9BRR0 538 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 BRIP1Q9BX63 1249 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 MYH14Q7Z406 1995 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 URI1O94763 535 aaPredicted RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 CAMTA2O94983 1202 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 CALM1P0DP23 149 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 CALM2P0DP24 149 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 CALM3P0DP25 149 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 CASQ1P31415 396 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 KRT2P35908 639 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 BCAMP50895 628 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 NPY5RQ15761 445 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 ADGRA1Q86SQ6 560 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 TRMT44Q8IYL2 757 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 ENAHQ8N8S7 591 aaPredicted RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 RIOK1Q9BRS2 568 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 CABP5Q9NP86 173 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 SAMSN1Q9NSI8 373 aaKnown RBP7.6□□□□□ -1.19
CDH12-203ENST00000517378 SYNRGQ9UMZ2 1314 aa7.6□□□□□ -1.19
CDH12-203ENST00000517378 AKR1B15C9JRZ8 316 aaPredicted RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 DDAH1O94760 285 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 IGHMBP2P38935 993 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 ZNF827Q17R98 1081 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 RRP12Q5JTH9 1297 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 TMCO3Q6UWJ1 677 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 USP49Q70CQ1 688 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 GRAMD1CQ8IYS0 662 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 CCDC51Q96ER9 411 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 PAGE5Q96GU1 130 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 CTAGE1Q96RT6 745 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 ZSCAN10Q96SZ4 725 aaPredicted RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 CDC5LQ99459 802 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 CARD6Q9BX69 1037 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 CCDC87Q9NVE4 849 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 BTG4Q9NY30 223 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 ADD3Q9UEY8 706 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 PDS5AQ29RF7 1337 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 CCDC175P0C221 793 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 ADKP55263 362 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 ATP2C1P98194 919 aaPredicted RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 CHRNDQ07001 517 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 ZNF771Q7L3S4 317 aaPredicted RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 RABGGTAQ92696 567 aa7.59□□□□□ -1.19
CDH12-203ENST00000517378 PYM1Q9BRP8 204 aaKnown RBP7.59□□□□□ -1.19
CDH12-203ENST00000517378 CNTNAP5Q8WYK1 1306 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 COL24A1Q17RW2 1714 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 MAGEB6P1A0A0J9YX57 407 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 PPP1R3GB7ZBB8 358 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 SNAP23O00161 211 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 MFAP3LO75121 409 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 CD44P16070 742 aaKnown RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 CYP7A1P22680 504 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 TRAPPC10P48553 1259 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 GNG11P61952 73 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 PPP2R3AQ06190 1150 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 TROAPQ12815 778 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 E2F4Q16254 413 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 EARS2Q5JPH6 523 aaKnown RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 MIGA1Q8NAN2 632 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 SYMPKQ92797 1274 aaKnown RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 LRP2BPQ9P2M1 347 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 AHDC1Q5TGY3 1603 aaPredicted RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 FAM205CA6NFA0 338 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 LRRC10BA6NIK2 292 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 ORC4O43929 436 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 PTPN21Q16825 1174 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 CC2D1AQ6P1N0 951 aaPredicted RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 TMTC3Q6ZXV5 915 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 RASGRP2Q7LDG7 609 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 CATIPQ7Z7H3 387 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 PDILTQ8N807 584 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 NUP133Q8WUM0 1156 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 DHX58Q96C10 678 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 MRPL44Q9H9J2 332 aaKnown RBP7.58□□□□□ -1.2
CDH12-203ENST00000517378 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 VPS54Q9P1Q0 977 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH12-203ENST00000517378 ADGRG1Q9Y653 693 aa7.58□□□□□ -1.2
CDH12-203ENST00000517378 CCDC88AQ3V6T2 1871 aa7.57□□□□□ -1.2
CDH12-203ENST00000517378 NPHP1O15259 732 aa7.57□□□□□ -1.2
CDH12-203ENST00000517378 TBC1D8O95759 1140 aa7.57□□□□□ -1.2
CDH12-203ENST00000517378 CRKLP46109 303 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms