RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 MCM6Q14566 821 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PUM3Q15397 648 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ELF2Q15723 593 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP2R5EQ16537 467 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZSCAN26Q16670 478 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LONRF3Q496Y0 759 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KMT5BQ4FZB7 885 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC152Q4G0S7 254 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 VWA3BQ502W6 1294 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PARP10Q53GL7 1025 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ODF2Q5BJF6 829 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC122Q5T0U0 273 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 C10orf76Q5T2E6 689 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFIT1BQ5T764 474 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ALS2CLQ60I27 953 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARL6IP4Q66PJ3 421 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MCTP2Q6DN12 878 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TTLL5Q6EMB2 1281 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CNNM4Q6P4Q7 775 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARHGAP27Q6ZUM4 889 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 C11orf57Q6ZUT1 292 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CACNA2D4Q7Z3S7 1137 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC91Q7Z6B0 441 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SGMS1Q86VZ5 419 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC50Q8IVM0 306 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TEX2Q8IWB9 1127 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFT20Q8IY31 132 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 C17orf53Q8N3J3 647 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CRACR2BQ8N4Y2 399 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RNF10Q8N5U6 811 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC155Q8N6L0 562 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SPATA5Q8NB90 893 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PNMA1Q8ND90 353 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRIM58Q8NG06 486 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC26Q8TAB7 109 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RUBCNQ92622 972 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TAF4BQ92750 862 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 DDX12PQ92771 950 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SMARCC1Q92922 1105 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC59Q96AG4 307 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KIF12Q96FN5 646 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 DHTKD1Q96HY7 919 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF496Q96IT1 587 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CALR3Q96L12 384 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 AK8Q96MA6 479 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SEC62Q99442 399 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 EPAS1Q99814 870 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CDCA7Q9BWT1 371 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PLA2G12BQ9BX93 195 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RNF26Q9BY78 433 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PARD6BQ9BYG5 372 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CRNKL1Q9BZJ0 848 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 EDEM3Q9BZQ6 932 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANKRD2Q9GZV1 360 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GLT8D2Q9H1C3 349 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TAOK3Q9H2K8 898 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KCNF1Q9H3M0 494 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KAT14Q9H8E8 782 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MKNK2Q9HBH9 465 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 C6orf50Q9HD87 102 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LZTFL1Q9NQ48 299 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 JADE2Q9NQC1 790 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRDM11Q9NQV5 511 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SH3GLB2Q9NR46 395 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 AATFQ9NY61 560 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZSWIM5Q9P217 1185 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SEC63Q9UGP8 760 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SERTAD1Q9UHV2 236 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RWDD2AQ9UIY3 292 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADAM21Q9UKJ8 722 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRDM4Q9UKN5 801 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 DENND2AQ9ULE3 1009 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GUCA1BQ9UMX6 200 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 JRKLQ9Y4A0 524 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 NFE2L3Q9Y4A8 694 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 EPN1Q9Y6I3 576 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ITIH6Q6UXX5 1313 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 WDR17Q8IZU2 1322 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC88AQ3V6T2 1871 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH3P11055 1940 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH2Q9UKX2 1941 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 DIP2BQ9P265 1576 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RIMBP3CA6NJZ7 1639 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 RIMBP3BA6NNM3 1639 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 RIMBP3Q9UFD9 1639 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 SETD1AO15047 1707 aaKnown RBP2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 RGPD2P0DJD1 1756 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 RGPD5Q99666 1765 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH11P35749 1972 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 A0A087WUV0 522 aaPredicted RBP2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM237AA0A1B0GTK4 181 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 A0A1W2PQC6 194 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 TARSL2A2RTX5 802 aaKnown RBP2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC10BA6NIK2 292 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM177BA6PVY3 158 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 BTBD18B2RXH4 712 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 B4E1Z4 1266 aa2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 GCOM1H8Y6P7 765 aaPredicted RBP2.31□□□□□ -2.04
RNU1-40P-201ENST00000516816 SH2B2O14492 632 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms