RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 LEO1Q8WVC0 666 aaPredicted RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 RNF26Q9BY78 433 aaPredicted RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 EHD4Q9H223 541 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 TDRD3Q9H7E2 651 aaKnown RBP14.93□□□□□ -0.02
PVT1-203ENST00000513868 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
PVT1-203ENST00000513868 DDTLA6NHG4 134 aaPredicted RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 DEXIO95424 95 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 SHMT1P34896 483 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 UBE2HP62256 183 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 KIF23Q02241 960 aaPredicted RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 PKN1Q16512 942 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 CSPP1Q1MSJ5 1256 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 TRIM22Q8IYM9 498 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 SRBD1Q8N5C6 995 aaKnown RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 PNMA1Q8ND90 353 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 MAP3K14Q99558 947 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 TMEM47Q9BQJ4 181 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 SCAND2PQ9GZW5 306 aaPredicted RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 KAT14Q9H8E8 782 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 TMEM63CQ9P1W3 806 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 RBM27Q9P2N5 1060 aaKnown RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 SWAP70Q9UH65 585 aa14.92□□□□□ -0.02
PVT1-203ENST00000513868 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
PVT1-203ENST00000513868 SBF1O95248 1867 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 IGKV6D-41A0A0C4DH26 115 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 PRPF3O43395 683 aaKnown RBP14.91□□□□□ -0.02
PVT1-203ENST00000513868 SLURP2P0DP57 97 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 TCP10Q12799 353 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 NLGN2Q8NFZ4 835 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 WASF1Q92558 559 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 CEP95Q96GE4 821 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 DNAJC18Q9H819 358 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 BCS1LQ9Y276 419 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 CNTNAP5Q8WYK1 1306 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 LTBP3Q9NS15 1303 aa14.91□□□□□ -0.02
PVT1-203ENST00000513868 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 AKR1B1P15121 316 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 PRELPP51888 382 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 GRM4Q14833 912 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 ATL3Q6DD88 541 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 AGBL3Q8NEM8 1001 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 CTCFLQ8NI51 663 aaPredicted RBP14.9□□□□□ -0.02
PVT1-203ENST00000513868 SPATA32Q96LK8 384 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 USP28Q96RU2 1077 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 FTOQ9C0B1 505 aaKnown RBP eCLIP14.9□□□□□ -0.02
PVT1-203ENST00000513868 DHX36Q9H2U1 1008 aaKnown RBP14.9□□□□□ -0.02
PVT1-203ENST00000513868 CFAP45Q9UL16 551 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 COL2A1P02458 1487 aaPredicted RBP14.9□□□□□ -0.02
PVT1-203ENST00000513868 ATRNL1Q5VV63 1379 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 HLA-DOAP06340 250 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 U2AF2P26368 475 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■■■■□ 25.2
PVT1-203ENST00000513868 BRAPQ7Z569 592 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 MAD2L2Q9UI95 211 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 RCOR1Q9UKL0 485 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 STX8Q9UNK0 236 aa14.9□□□□□ -0.02
PVT1-203ENST00000513868 V9GY48 417 aaPredicted RBP14.9□□□□□ -0.02
PVT1-203ENST00000513868 ENTPD3O75355 529 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 SLC35G1Q2M3R5 365 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 ZSCAN23Q3MJ62 389 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
PVT1-203ENST00000513868 STAG2Q8N3U4 1231 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 PGBD1Q96JS3 809 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 ZNF396Q96N95 335 aaPredicted RBP14.89□□□□□ -0.03
PVT1-203ENST00000513868 MTMR4Q9NYA4 1195 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
PVT1-203ENST00000513868 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 FSD2A1L4K1 749 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 MMP1P03956 469 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
PVT1-203ENST00000513868 KIF5BP33176 963 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 MYSM1Q5VVJ2 828 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 CIAPIN1Q6FI81 312 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 MTMR14Q8NCE2 650 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 ZBED3Q96IU2 234 aaPredicted RBP14.88□□□□□ -0.03
PVT1-203ENST00000513868 HDAC9Q9UKV0 1011 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 KCNJ14Q9UNX9 436 aa14.88□□□□□ -0.03
PVT1-203ENST00000513868 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
PVT1-203ENST00000513868 ZNF445P59923 1031 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 TRIM29Q14134 588 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 DLGAP5Q15398 846 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 RASGRP2Q7LDG7 609 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 GAS2L3Q86XJ1 694 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 JDP2Q8WYK2 163 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 RTEL1Q9NZ71 1219 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 ZNF70Q9UC06 446 aaPredicted RBP14.87□□□□□ -0.03
PVT1-203ENST00000513868 FAM196BA6NMK8 535 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 RASSF7Q02833 373 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
PVT1-203ENST00000513868 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 TATDN1Q6P1N9 297 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
PVT1-203ENST00000513868 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
PVT1-203ENST00000513868 CNTNAP1P78357 1384 aa14.86□□□□□ -0.03
PVT1-203ENST00000513868 SHTN1A0MZ66 631 aa14.86□□□□□ -0.03
PVT1-203ENST00000513868 BTBD18B2RXH4 712 aa14.86□□□□□ -0.03
PVT1-203ENST00000513868 CYTH3O43739 400 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms