RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 IRX3P78415 501 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-219ENST00000508659 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-219ENST00000508659 FAM227BQ96M60 508 aa20.24■□□□□ 0.83
CLDND1-219ENST00000508659 OSBPP22059 807 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 GUCY1A2P33402 732 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 ICA1Q05084 483 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 NMIQ13287 307 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-219ENST00000508659 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 FBXO46Q6PJ61 603 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-219ENST00000508659 USP17L2Q6R6M4 530 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 STK11IPQ8N1F8 1099 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 ZNF287Q9HBT7 754 aa20.23■□□□□ 0.83
CLDND1-219ENST00000508659 ACER1Q8TDN7 264 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 C12orf42Q96LP6 360 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 KIAA1683Q9H0B3 1180 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 ASCC2Q9H1I8 757 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-219ENST00000508659 MKNK2Q9HBH9 465 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 ARHGEF10LQ9HCE6 1279 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 DIAPH3Q9NSV4 1193 aa20.22■□□□□ 0.83
CLDND1-219ENST00000508659 HIP1O00291 1037 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 SLC3A2P08195 630 aaKnown RBP20.21■□□□□ 0.83
CLDND1-219ENST00000508659 BCRP11274 1271 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 SH2D4AQ9H788 454 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 EMILIN3Q9NT22 766 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 HPS5Q9UPZ3 1129 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 MYH8P13535 1937 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
CLDND1-219ENST00000508659 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-219ENST00000508659 VCAM1P19320 739 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 SDSP20132 328 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 MFAP1P55081 439 aaKnown RBP20.2■□□□□ 0.82
CLDND1-219ENST00000508659 PPARAQ07869 468 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 CLEC10AQ8IUN9 316 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 ANKRD13CQ8N6S4 541 aa20.2■□□□□ 0.82
CLDND1-219ENST00000508659 NEFLP07196 543 aa20.19■□□□□ 0.82
CLDND1-219ENST00000508659 GSPT1P15170 499 aaKnown RBP20.19■□□□□ 0.82
CLDND1-219ENST00000508659 HOXA7P31268 230 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-219ENST00000508659 GCLCP48506 637 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-219ENST00000508659 CAP1Q01518 475 aa20.19■□□□□ 0.82
CLDND1-219ENST00000508659 FAM110CQ1W6H9 321 aa20.19■□□□□ 0.82
CLDND1-219ENST00000508659 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
CLDND1-219ENST00000508659 CENPQQ7L2Z9 268 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-219ENST00000508659 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-219ENST00000508659 FOXP2O15409 715 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-219ENST00000508659 GNRH1P01148 92 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 RASA1P20936 1047 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 PSMC4P43686 418 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 FCGRTP55899 365 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 PDE4BQ07343 736 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 KANSL2Q9H9L4 492 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
CLDND1-219ENST00000508659 A0A1W2PRG0 241 aa20.17■□□□□ 0.82
CLDND1-219ENST00000508659 PRDM1O75626 825 aa20.17■□□□□ 0.82
CLDND1-219ENST00000508659 ATP2B2Q01814 1243 aa20.17■□□□□ 0.82
CLDND1-219ENST00000508659 CWC27Q6UX04 472 aaKnown RBP20.17■□□□□ 0.82
CLDND1-219ENST00000508659 GTF3C2Q8WUA4 911 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-219ENST00000508659 ZMYM6O95789 1325 aa20.17■□□□□ 0.82
CLDND1-219ENST00000508659 ZSWIM8A7E2V4 1837 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L15C9J2P7 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L13C9JLJ4 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L11C9JVI0 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L18D6R9N7 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L22D6RA61 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L17D6RBQ6 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L19D6RCP7 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L20D6RJB6 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 HSPD1P10809 573 aaKnown RBP20.16■□□□□ 0.82
CLDND1-219ENST00000508659 HERVK_113P62684 666 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 USP17L24Q0WX57 530 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 ZNF444Q8N0Y2 327 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-219ENST00000508659 TRIM47Q96LD4 638 aa20.16■□□□□ 0.82
CLDND1-219ENST00000508659 RPAP3Q9H6T3 665 aaPredicted RBP20.16■□□□□ 0.82
CLDND1-219ENST00000508659 EEF2P13639 858 aaKnown RBP20.15■□□□□ 0.82
CLDND1-219ENST00000508659 CTGFP29279 349 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 LPAR1Q92633 364 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 TANGO6Q9C0B7 1094 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 VCPKMTQ9H867 229 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 TMX2Q9Y320 296 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 PTCH2Q9Y6C5 1203 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 PLIN4Q96Q06 1357 aa20.15■□□□□ 0.82
CLDND1-219ENST00000508659 MYPNQ86TC9 1320 aa20.14■□□□□ 0.81
CLDND1-219ENST00000508659 TNPO2O14787 897 aaKnown RBP20.14■□□□□ 0.81
CLDND1-219ENST00000508659 HOXD10P28358 340 aa20.14■□□□□ 0.81
CLDND1-219ENST00000508659 PRMT2P55345 433 aa20.14■□□□□ 0.81
CLDND1-219ENST00000508659 ALX1Q15699 326 aa20.14■□□□□ 0.81
CLDND1-219ENST00000508659 P2RX7Q99572 595 aaKnown RBP20.14■□□□□ 0.81
CLDND1-219ENST00000508659 GOPCQ9HD26 462 aa20.14■□□□□ 0.81
CLDND1-219ENST00000508659 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
CLDND1-219ENST00000508659 TSPY3P0CV98 308 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 TSPY8P0CW00 308 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 CATSPERGQ6ZRH7 1159 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 SPICE1Q8N0Z3 855 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 PAGR1Q9BTK6 254 aa20.13■□□□□ 0.81
CLDND1-219ENST00000508659 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLDND1-219ENST00000508659 MORF4L1Q9UBU8 362 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms