RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 TNFRSF10AO00220 468 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 FOSL2P15408 326 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 CAP2P40123 477 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 BTDP43251 543 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 RTP1P59025 263 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 HERVK_113P62684 666 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 SMAD3P84022 425 aaKnown RBP7.17□□□□□ -1.26
KDM3B-205ENST00000508386 GPR142Q7Z601 462 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 GPRC5AQ8NFJ5 357 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 BADQ92934 168 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 SALL2Q9Y467 1007 aaPredicted RBP7.17□□□□□ -1.26
KDM3B-205ENST00000508386 NDUFB9Q9Y6M9 179 aa7.17□□□□□ -1.26
KDM3B-205ENST00000508386 FRMPD3Q5JV73 1810 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 FAM205CA6NFA0 338 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 SLC5A1P13866 664 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 ZKSCAN1P17029 563 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 PLA2G5P39877 138 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 BACE1P56817 501 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 ERVK-24P63145 666 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 MTMR2Q13614 643 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 RASGRF1Q13972 1273 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 TJAP1Q5JTD0 557 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 GJC2Q5T442 439 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 SLC39A5Q6ZMH5 540 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 NPLOC4Q8TAT6 608 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 LBHD1Q9BQE6 289 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 WDR18Q9BV38 432 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 OSBPL5Q9H0X9 879 aaPredicted RBP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 DNAJC18Q9H819 358 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.16□□□□□ -1.26
KDM3B-205ENST00000508386 EMILIN3Q9NT22 766 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 RLFQ13129 1914 aa7.16□□□□□ -1.26
KDM3B-205ENST00000508386 CYP2C19P33261 490 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 ZEB1P37275 1124 aaPredicted RBP7.15□□□□□ -1.26
KDM3B-205ENST00000508386 RGS2P41220 211 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 TIMM10P62072 90 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 MECOMQ03112 1051 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 MAP2K5Q13163 448 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 SNX17Q15036 470 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 ATP2B3Q16720 1220 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 TRIM60Q495X7 471 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 CCDC102BQ68D86 513 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 TBC1D9Q6ZT07 1266 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 PLEKHH3Q7Z736 793 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 PTCD2Q8WV60 388 aaKnown RBP7.15□□□□□ -1.26
KDM3B-205ENST00000508386 SOCS4Q8WXH5 440 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 LPAR1Q92633 364 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 SYMPKQ92797 1274 aaKnown RBP7.15□□□□□ -1.26
KDM3B-205ENST00000508386 EDC3Q96F86 508 aaKnown RBP7.15□□□□□ -1.26
KDM3B-205ENST00000508386 HS3ST6Q96QI5 342 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 SIL1Q9H173 461 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 ZSWIM6Q9HCJ5 1215 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 PDLIM7Q9NR12 457 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 DDX20Q9UHI6 824 aaKnown RBP7.15□□□□□ -1.26
KDM3B-205ENST00000508386 DENND2AQ9ULE3 1009 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 ATP11BQ9Y2G3 1177 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 MROH7-TTC4A0A0A0MT08 1334 aa7.15□□□□□ -1.26
KDM3B-205ENST00000508386 SIPA1L1O43166 1804 aa7.15□□□□□ -1.27
KDM3B-205ENST00000508386 DNM1LO00429 736 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 MAPK4P31152 587 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 MAP3K12Q12852 859 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 PABPC4Q13310 644 aaKnown RBP eCLIP7.14□□□□□ -1.27
KDM3B-205ENST00000508386 ADGRE1Q14246 886 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 ANO1Q5XXA6 986 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 PI16Q6UXB8 463 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 WDR63Q8IWG1 891 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 TRMT44Q8IYL2 757 aaKnown RBP7.14□□□□□ -1.27
KDM3B-205ENST00000508386 MRPL50Q8N5N7 158 aaKnown RBP7.14□□□□□ -1.27
KDM3B-205ENST00000508386 OXER1Q8TDS5 423 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 ATAD5Q96QE3 1844 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 APBA2Q99767 749 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 BTBD7Q9P203 1132 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 ABCF2Q9UG63 623 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 PA2G4Q9UQ80 394 aaKnown RBP7.14□□□□□ -1.27
KDM3B-205ENST00000508386 TRANK1O15050 2925 aa7.14□□□□□ -1.27
KDM3B-205ENST00000508386 MUC6Q6W4X9 2439 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 SMCHD1A6NHR9 2005 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 GRXCR1A8MXD5 290 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 SEMA3EO15041 775 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 HOXC6P09630 235 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 CYBAP13498 195 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PTPREP23469 700 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PBX2P40425 430 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 IRX3P78415 501 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 TLE2Q04725 743 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PDE3AQ14432 1141 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PRAMEF19Q5SWL8 479 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 C16orf59Q7L2K0 433 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 METTL16Q86W50 562 aaKnown RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 DZIP1Q86YF9 867 aaKnown RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 SH3RF3Q8TEJ3 882 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 NSUN4Q96CB9 384 aaKnown RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 NECAB3Q96P71 396 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PAGR1Q9BTK6 254 aa7.13□□□□□ -1.27
KDM3B-205ENST00000508386 PRDM5Q9NQX1 630 aaPredicted RBP7.13□□□□□ -1.27
KDM3B-205ENST00000508386 CEP126Q9P2H0 1117 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms