RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 A0A0G2JMZ2 1700 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 RLFQ13129 1914 aa17.23■□□□□ 0.35
POLR2J3-207ENST00000503564 ZNF236Q9UL36 1845 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 COL6A1P12109 1028 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 VCAM1P19320 739 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 CCND3P30281 292 aaPredicted RBP17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 SHMT1P34896 483 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 MAP3K12Q12852 859 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 ZYXQ15942 572 aaKnown RBP17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 FEZ1Q99689 392 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 KIAA1683Q9H0B3 1180 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
POLR2J3-207ENST00000503564 MYH8P13535 1937 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L15C9J2P7 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L13C9JLJ4 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L11C9JVI0 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L18D6R9N7 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L22D6RA61 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L17D6RBQ6 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L19D6RCP7 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L20D6RJB6 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 USP17L24Q0WX57 530 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 LHX8Q68G74 356 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 AACSQ86V21 672 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 ACER1Q8TDN7 264 aa17.21■□□□□ 0.35
POLR2J3-207ENST00000503564 SYN1P17600 705 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 PLCD1P51178 756 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 USP14P54578 494 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 GABPAQ06546 454 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 RAB3GAP1Q15042 981 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 CERKLQ49MI3 558 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 ERC1Q8IUD2 1116 aa17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
POLR2J3-207ENST00000503564 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
POLR2J3-207ENST00000503564 SPDYE16A6NNV3 312 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-207ENST00000503564 MAGEA10P43363 369 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-207ENST00000503564 FLRT1Q9NZU1 646 aa17.19■□□□□ 0.34
POLR2J3-207ENST00000503564 BTBD7Q9P203 1132 aa17.19■□□□□ 0.34
POLR2J3-207ENST00000503564 PDE6AP16499 860 aa17.18■□□□□ 0.34
POLR2J3-207ENST00000503564 CCNA1P78396 465 aa17.18■□□□□ 0.34
POLR2J3-207ENST00000503564 EVX2Q03828 476 aa17.18■□□□□ 0.34
POLR2J3-207ENST00000503564 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
POLR2J3-207ENST00000503564 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
POLR2J3-207ENST00000503564 BAZ2AQ9UIF9 1905 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 MAGEB6P1A0A0J9YX57 407 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 SLC15A5A6NIM6 579 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 HOXC6P09630 235 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 PTPREP23469 700 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 GRB14Q14449 540 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 CABP5Q9NP86 173 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 MYH7P12883 1935 aa17.17■□□□□ 0.34
POLR2J3-207ENST00000503564 TCRBV5S4A2TA0A5A2 114 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 IGHA2P01877 340 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 SEPT2Q15019 361 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 LRRC26Q2I0M4 334 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 LRIT3Q3SXY7 679 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 GPR153Q6NV75 609 aa17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-207ENST00000503564 LTBP2Q14767 1821 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 SLC9C2Q5TAH2 1124 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 TDHQ8IZJ6 230 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 NPLOC4Q8TAT6 608 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
POLR2J3-207ENST00000503564 MFSD14CQ5VZR4 134 aa17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 SDR42E1Q8WUS8 393 aa17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 MCM9Q9NXL9 1143 aa17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
POLR2J3-207ENST00000503564 COL11A1P12107 1806 aaPredicted RBP17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 GOLIM4O00461 696 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 CYP2D6P10635 497 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 SLC44A5Q8NCS7 719 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 TRPV1Q8NER1 839 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 KIF1BPQ96EK5 621 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 IVNS1ABPQ9Y6Y0 642 aa17.13■□□□□ 0.33
POLR2J3-207ENST00000503564 CYBAP13498 195 aa17.12■□□□□ 0.33
POLR2J3-207ENST00000503564 CYP2C19P33261 490 aa17.12■□□□□ 0.33
POLR2J3-207ENST00000503564 KIAA1755Q5JYT7 1200 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms