RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 TMOD4Q9NZQ9 345 aa13.62□□□□□ -0.23
UBE2D3-211ENST00000502404 CEP290O15078 2479 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 INHAP05111 366 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 PPP4CP60510 307 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 ATP8B2P98198 1209 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 HIC1Q14526 733 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 TNNI3KQ59H18 835 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 SH3RF3Q8TEJ3 882 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 ZNF384Q8TF68 577 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 ZNF512BQ96KM6 892 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 WDR18Q9BV38 432 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 FPGT-TNNI3KV9GXZ4 949 aa13.61□□□□□ -0.23
UBE2D3-211ENST00000502404 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 C19orf81C9J6K1 198 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 ELNP15502 786 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 HMGCS2P54868 508 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 IRX3P78415 501 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 TREML2Q5T2D2 321 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 TMED8Q6PL24 325 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 TMEM57Q8N5G2 664 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 ZSWIM8A7E2V4 1837 aa13.6□□□□□ -0.23
UBE2D3-211ENST00000502404 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 BACE1P56817 501 aa13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 GTF3C2Q8WUA4 911 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 DOCK1Q14185 1865 aa13.59□□□□□ -0.23
UBE2D3-211ENST00000502404 HMGCRP04035 888 aa13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 PTPREP23469 700 aa13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 MAPKAPK5Q8IW41 473 aa13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 HMX1Q9NP08 348 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-211ENST00000502404 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 MTMR2Q13614 643 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 NECAB2Q7Z6G3 386 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 HS3ST6Q96QI5 342 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-211ENST00000502404 PPP1R3GB7ZBB8 358 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 CYP7A1P22680 504 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 ZAP70P43403 619 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 USP5P45974 858 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 MGAMO43451 1857 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 FLT1P17948 1338 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
UBE2D3-211ENST00000502404 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 MAPK4P31152 587 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 PBX2P40425 430 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 P2RX7Q99572 595 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
UBE2D3-211ENST00000502404 BRCA2P51587 3418 aa13.54□□□□□ -0.24
UBE2D3-211ENST00000502404 GLRX3O76003 335 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-211ENST00000502404 MS4A1P11836 297 aa13.54□□□□□ -0.24
UBE2D3-211ENST00000502404 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-211ENST00000502404 COL9A1P20849 921 aa13.54□□□□□ -0.24
UBE2D3-211ENST00000502404 HERVK_113P62684 666 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms