RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 USP17L10C9JJH3 530 aa18.46■□□□□ 0.55
CPNE1-228ENST00000498814 HSPA1AP0DMV8 641 aaKnown RBP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 HSPA1BP0DMV9 641 aaKnown RBP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 AKNAD1Q5T1N1 836 aa18.46■□□□□ 0.55
CPNE1-228ENST00000498814 STAG1Q8WVM7 1258 aa18.46■□□□□ 0.55
CPNE1-228ENST00000498814 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 RNF41Q9H4P4 317 aaPredicted RBP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 KANSL2Q9H9L4 492 aa18.46■□□□□ 0.55
CPNE1-228ENST00000498814 ZCCHC17Q9NP64 241 aaKnown RBP18.46■□□□□ 0.55
CPNE1-228ENST00000498814 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
CPNE1-228ENST00000498814 MFSD6Q6ZSS7 791 aa18.45■□□□□ 0.54
CPNE1-228ENST00000498814 ANKRD23Q86SG2 305 aa18.45■□□□□ 0.54
CPNE1-228ENST00000498814 TBC1D10CQ8IV04 446 aa18.45■□□□□ 0.54
CPNE1-228ENST00000498814 PROCA1Q8NCQ7 364 aaPredicted RBP18.45■□□□□ 0.54
CPNE1-228ENST00000498814 KIAA1683Q9H0B3 1180 aa18.45■□□□□ 0.54
CPNE1-228ENST00000498814 MYH4Q9Y623 1939 aa18.45■□□□□ 0.54
CPNE1-228ENST00000498814 PLIN4Q96Q06 1357 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 IGKV6D-41A0A0C4DH26 115 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 BTBD19C9JJ37 291 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 TRPA1O75762 1119 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 NT5C2P49902 561 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 HMGCS2P54868 508 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 ICA1Q05084 483 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 MTMR2Q13614 643 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 GPAT2Q6NUI2 795 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 SIAH1Q8IUQ4 282 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 FAM43AQ8N2R8 423 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 NEDD1Q8NHV4 660 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 ACER1Q8TDN7 264 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 CFHR5Q9BXR6 569 aa18.44■□□□□ 0.54
CPNE1-228ENST00000498814 TSPY3P0CV98 308 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 TSPY8P0CW00 308 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 USP14P54578 494 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 TFAP4Q01664 338 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 FEZ1Q99689 392 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 ARHGEF10LQ9HCE6 1279 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
CPNE1-228ENST00000498814 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
CPNE1-228ENST00000498814 A0A1W2PRG0 241 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 FOXN1O15353 648 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 RANBP6O60518 1105 aaKnown RBP18.42■□□□□ 0.54
CPNE1-228ENST00000498814 CYP21A2P08686 494 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 FAM47AQ5JRC9 791 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 CLEC10AQ8IUN9 316 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 C12orf42Q96LP6 360 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 TOMM22Q9NS69 142 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 EMILIN3Q9NT22 766 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 AGTPBP1Q9UPW5 1226 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
CPNE1-228ENST00000498814 PDHXO00330 501 aa18.41■□□□□ 0.54
CPNE1-228ENST00000498814 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
CPNE1-228ENST00000498814 RRP12Q5JTH9 1297 aaKnown RBP18.41■□□□□ 0.54
CPNE1-228ENST00000498814 MTMR4Q9NYA4 1195 aa18.41■□□□□ 0.54
CPNE1-228ENST00000498814 CTCFP49711 727 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-228ENST00000498814 DGKZQ13574 1117 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 TAF1CQ15572 869 aaPredicted RBP18.4■□□□□ 0.54
CPNE1-228ENST00000498814 PPP4R3BQ5MIZ7 849 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 ESR2Q92731 530 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 CEP95Q96GE4 821 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 TCP11L1Q9NUJ3 509 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 NEDD4P46934 1319 aa18.4■□□□□ 0.54
CPNE1-228ENST00000498814 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 HSPA8P11142 646 aaKnown RBP18.39■□□□□ 0.53
CPNE1-228ENST00000498814 ATP2B2Q01814 1243 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 PABPC4Q13310 644 aaKnown RBP eCLIP18.39■□□□□ 0.532e-15■■■□□ 17.2
CPNE1-228ENST00000498814 CRHR2Q13324 411 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
CPNE1-228ENST00000498814 MKL1Q969V6 931 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 KRT23Q9C075 422 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 ZFYVE28Q9HCC9 887 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 IL17RBQ9NRM6 502 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 SYNPO2Q9UMS6 1093 aa18.39■□□□□ 0.53
CPNE1-228ENST00000498814 REC8O95072 547 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 TTLL1O95922 423 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 HOXA7P31268 230 aaPredicted RBP18.38■□□□□ 0.53
CPNE1-228ENST00000498814 NOVP48745 357 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
CPNE1-228ENST00000498814 VCPKMTQ9H867 229 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 CLIP2Q9UDT6 1046 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
CPNE1-228ENST00000498814 B4E1Z4 1266 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 SLC27A2O14975 620 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 KDM4AO75164 1064 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 VCAM1P19320 739 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 LPAR1Q92633 364 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 PARK7Q99497 189 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms