RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ATP2B2Q01814 1243 aa19.22■□□□□ 0.67
HDAC6-236ENST00000498808 GRB14Q14449 540 aa19.22■□□□□ 0.67
HDAC6-236ENST00000498808 GJC2Q5T442 439 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-236ENST00000498808 GORABQ5T7V8 394 aa19.22■□□□□ 0.67
HDAC6-236ENST00000498808 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L15C9J2P7 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L13C9JLJ4 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L11C9JVI0 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L18D6R9N7 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L22D6RA61 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L17D6RBQ6 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L19D6RCP7 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L20D6RJB6 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 BAG3O95817 575 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 GH2P01242 217 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 CYBAP13498 195 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 PLCG2P16885 1265 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 SLFN5Q08AF3 891 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 USP17L24Q0WX57 530 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 MTX1Q13505 466 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 ZYXQ15942 572 aaKnown RBP19.21■□□□□ 0.67
HDAC6-236ENST00000498808 NAA16Q6N069 864 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-236ENST00000498808 SLC39A5Q6ZMH5 540 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 BADQ92934 168 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 PRDM5Q9NQX1 630 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-236ENST00000498808 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
HDAC6-236ENST00000498808 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
HDAC6-236ENST00000498808 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
HDAC6-236ENST00000498808 FOSL2P15408 326 aa19.2■□□□□ 0.66
HDAC6-236ENST00000498808 LBX2Q6XYB7 198 aa19.2■□□□□ 0.66
HDAC6-236ENST00000498808 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
HDAC6-236ENST00000498808 PDLIM7Q9NR12 457 aa19.2■□□□□ 0.66
HDAC6-236ENST00000498808 SAP30BPQ9UHR5 308 aaKnown RBP19.2■□□□□ 0.66
HDAC6-236ENST00000498808 MUC3AQ02505 3323 aa19.2■□□□□ 0.66
HDAC6-236ENST00000498808 SNX17Q15036 470 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 TRIM60Q495X7 471 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 ANO1Q5XXA6 986 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 FEZ1Q99689 392 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 SNRKQ9NRH2 765 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
HDAC6-236ENST00000498808 UQCRFS1P1P0C7P4 283 aa19.18■□□□□ 0.66
HDAC6-236ENST00000498808 VCAM1P19320 739 aa19.18■□□□□ 0.66
HDAC6-236ENST00000498808 ARRDC4Q8NCT1 418 aa19.18■□□□□ 0.66
HDAC6-236ENST00000498808 SYMPKQ92797 1274 aaKnown RBP19.18■□□□□ 0.66
HDAC6-236ENST00000498808 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
HDAC6-236ENST00000498808 ZNF236Q9UL36 1845 aa19.18■□□□□ 0.66
HDAC6-236ENST00000498808 TRIM43BA6NCK2 446 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 SPDYE16A6NNV3 312 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-236ENST00000498808 KBTBD13C9JR72 458 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 HLA-DOAP06340 250 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 ACER1Q8TDN7 264 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 TRIM43Q96BQ3 446 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-236ENST00000498808 KIAA1683Q9H0B3 1180 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 MYH1P12882 1939 aa19.17■□□□□ 0.66
HDAC6-236ENST00000498808 DYNLL1P63167 89 aaKnown RBP19.16■□□□□ 0.66
HDAC6-236ENST00000498808 OLFML2BQ68BL8 750 aa19.16■□□□□ 0.66
HDAC6-236ENST00000498808 TATDN1Q6P1N9 297 aa19.16■□□□□ 0.66
HDAC6-236ENST00000498808 USP38Q8NB14 1042 aa19.16■□□□□ 0.66
HDAC6-236ENST00000498808 CDCA7LQ96GN5 454 aa19.16■□□□□ 0.66
HDAC6-236ENST00000498808 TMEM265A0A087WTH1 108 aa19.15■□□□□ 0.66
HDAC6-236ENST00000498808 CYP2E1P05181 493 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-236ENST00000498808 ITGB8P26012 769 aa19.15■□□□□ 0.66
HDAC6-236ENST00000498808 USP14P54578 494 aa19.15■□□□□ 0.66
HDAC6-236ENST00000498808 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
HDAC6-236ENST00000498808 SEPT4O43236 478 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-236ENST00000498808 GNAI3P08754 354 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 COL9A1P20849 921 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 ADORA2AP29274 412 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 ADCYAP1R1P41586 468 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 EPHB4P54760 987 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 RAB3GAP1Q15042 981 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 C1orf53Q5VUE5 145 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 DPP9Q86TI2 863 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 FERMT2Q96AC1 680 aa19.14■□□□□ 0.65
HDAC6-236ENST00000498808 RPAP3Q9H6T3 665 aaPredicted RBP19.14■□□□□ 0.65
HDAC6-236ENST00000498808 PNMA6EA0A0J9YXQ4 647 aa19.13■□□□□ 0.65
HDAC6-236ENST00000498808 LRRC41Q15345 812 aa19.13■□□□□ 0.65
HDAC6-236ENST00000498808 TJAP1Q5JTD0 557 aa19.13■□□□□ 0.65
HDAC6-236ENST00000498808 TTC39AQ5SRH9 613 aa19.13■□□□□ 0.65
HDAC6-236ENST00000498808 RNPC3Q96LT9 517 aaKnown RBP19.13■□□□□ 0.65
HDAC6-236ENST00000498808 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
HDAC6-236ENST00000498808 A0A0G2JMZ2 1700 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 COBLO75128 1261 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 TLE2Q04725 743 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 G3BP1Q13283 466 aaKnown RBP eCLIP19.12■□□□□ 0.65
HDAC6-236ENST00000498808 GRIN2CQ14957 1233 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 FAM47AQ5JRC9 791 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 PRAMEF19Q5SWL8 479 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 DBNDD2Q9BQY9 259 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 EHD4Q9H223 541 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 PIH1D3Q9NQM4 214 aaKnown RBP19.12■□□□□ 0.65
HDAC6-236ENST00000498808 SERPINB13Q9UIV8 391 aa19.12■□□□□ 0.65
HDAC6-236ENST00000498808 GUCY1A2P33402 732 aa19.11■□□□□ 0.65
HDAC6-236ENST00000498808 ZAP70P43403 619 aa19.11■□□□□ 0.65
HDAC6-236ENST00000498808 ABCB5Q2M3G0 1257 aa19.11■□□□□ 0.65
HDAC6-236ENST00000498808 CERKLQ49MI3 558 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-236ENST00000498808 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
HDAC6-236ENST00000498808 SMCHD1A6NHR9 2005 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms