RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	RECK	O95980	971 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	MMP10	P09238	476 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	DDR1	Q08345	913 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	MRPL58	Q14197	206 aa	Known RBP	9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	USPL1	Q5W0Q7	1092 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	ABHD17A	Q96GS6	310 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	FAM161B	Q96MY7	647 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	CHRD	Q9H2X0	955 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	HYPK	Q9NX55	129 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	CHPF2	Q9P2E5	772 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	ZNF652	Q9Y2D9	606 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	CD2AP	Q9Y5K6	639 aa		9.4	□□□□□ -0.9
GARNL3-222	ENST00000498801	KIF13B	Q9NQT8	1826 aa		9.4	□□□□□ -0.91
GARNL3-222	ENST00000498801	RNF123	Q5XPI4	1314 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	PIP4K2A	P48426	406 aa	Predicted RBP	9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	DAB2	P98082	770 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	CCIN	Q13939	588 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	NFIX	Q14938	502 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	GRIN2C	Q14957	1233 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	PROSER3	Q2NL68	480 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	MSL1	Q68DK7	614 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	TMC4	Q7Z404	712 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	GTPBP3	Q969Y2	492 aa	Known RBP	9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	STK31	Q9BXU1	1019 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	GSX2	Q9BZM3	304 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	ZFYVE28	Q9HCC9	887 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	IGSF5	Q9NSI5	407 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	PXDNL	A1KZ92	1463 aa		9.39	□□□□□ -0.91
GARNL3-222	ENST00000498801	SASH3	O75995	380 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	MYL6B	P14649	208 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	RARS	P54136	660 aa	Known RBP	9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	ALDH1L2	Q3SY69	923 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	KIF6	Q6ZMV9	814 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	KRT25	Q7Z3Z0	450 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	C1orf127	Q8N9H9	656 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	SSH1	Q8WYL5	1049 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	MARK1	Q9P0L2	795 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	CNTN3	Q9P232	1028 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	KIAA1551	Q9HCM1	1747 aa		9.38	□□□□□ -0.91
GARNL3-222	ENST00000498801	PPFIA3	O75145	1194 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	ANXA1	P04083	346 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	CD33	P20138	364 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	GNA15	P30679	374 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	PSMD2	Q13200	908 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	TRIM28	Q13263	835 aa	Known RBP	9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	TBC1D9B	Q66K14	1250 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	TTLL7	Q6ZT98	887 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	PLBD2	Q8NHP8	589 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	CCDC74A	Q96AQ1	378 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	SYT17	Q9BSW7	474 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	SMC4	Q9NTJ3	1288 aa		9.37	□□□□□ -0.91
GARNL3-222	ENST00000498801	UBN2	Q6ZU65	1347 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	KLRG2	A4D1S0	409 aa	Predicted RBP	9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	EREG	O14944	169 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	TARS	P26639	723 aa	Known RBP	9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	SPEM2	Q0P670	501 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	TTC39B	Q5VTQ0	682 aa	Predicted RBP	9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	ZNF34	Q8IZ26	560 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	XAGE3	Q8WTP9	111 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	PHAX	Q9H814	394 aa	Known RBP	9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	ZFAT	Q9P243	1243 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	PPP1R1B	Q9UD71	204 aa	Predicted RBP	9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	RCAN3	Q9UKA8	241 aa		9.36	□□□□□ -0.91
GARNL3-222	ENST00000498801	CACNA1F	O60840	1977 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	CDC14C	A4D256	554 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	SORBS3	O60504	671 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	MMP20	O60882	483 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	BCAR3	O75815	825 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	POLR3D	P05423	398 aa	Predicted RBP	9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	RARA	P10276	462 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	NFKB1	P19838	968 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	IRS1	P35568	1242 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	TGFB2	P61812	414 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	AIMP1	Q12904	312 aa	Known RBP	9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	HLF	Q16534	295 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	TSNAXIP1	Q2TAA8	658 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	PARP10	Q53GL7	1025 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	HSP90AB3P	Q58FF7	597 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	COPS6	Q7L5N1	327 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	G2E3	Q7L622	706 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	PNMA5	Q96PV4	448 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	SLC30A3	Q99726	388 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	NPHS2	Q9NP85	383 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	PHF24	Q9UPV7	400 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	ADCY9	O60503	1353 aa		9.35	□□□□□ -0.91
GARNL3-222	ENST00000498801	NTSR2	O95665	410 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	CYP2E1	P05181	493 aa	Predicted RBP	9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	FGFR3	P22607	806 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	VEGFB	P49765	207 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	PRR5L	Q6MZQ0	368 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	PI16	Q6UXB8	463 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	OR13H1	Q8NG92	308 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	ISCA1	Q9BUE6	129 aa		9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	GOLGB1	Q14789	3259 aa	Known RBP	9.34	□□□□□ -0.91
GARNL3-222	ENST00000498801	PTPRC	P08575	1304 aa		9.33	□□□□□ -0.92
GARNL3-222	ENST00000498801	KIF16B	Q96L93	1317 aa		9.33	□□□□□ -0.92

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