RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 PICK1Q9NRD5 415 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 AFG3L2Q9Y4W6 797 aa8.65□□□□□ -1.02
CHCHD3-206ENST00000496427 SYN1P17600 705 aa8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 COPS2P61201 443 aa8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 FAM9BQ8IZU0 186 aa8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 CDHR5Q9HBB8 845 aa8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 PA2G4Q9UQ80 394 aaKnown RBP8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
CHCHD3-206ENST00000496427 GAKO14976 1311 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 UNC80Q8N2C7 3258 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 RLFQ13129 1914 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 PEX10O60683 326 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 BTDP43251 543 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 IRF5Q13568 498 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 FASTKD5Q7L8L6 764 aaKnown RBP8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 PXYLP1Q8TE99 480 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 IDI2Q9BXS1 227 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 ABCF2Q9UG63 623 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 AGTPBP1Q9UPW5 1226 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 NAV1Q8NEY1 1877 aa8.63□□□□□ -1.03
CHCHD3-206ENST00000496427 CUL9Q8IWT3 2517 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 ZNFX1Q9P2E3 1918 aaKnown RBP8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 PTPRCP08575 1304 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 A0A1W2PPC1 479 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 ENTPD3O75355 529 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 NECAB2Q7Z6G3 386 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 DZIP1Q86YF9 867 aaKnown RBP8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 SSH1Q8WYL5 1049 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 COA7Q96BR5 231 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 GDF15Q99988 308 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 DENND2AQ9ULE3 1009 aa8.62□□□□□ -1.03
CHCHD3-206ENST00000496427 PARP14Q460N5 1801 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 ZNF521Q96K83 1311 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 DGAT1O75907 488 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 SLC19A1P41440 591 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 MAGEA10P43363 369 aaPredicted RBP8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 HMGCS2P54868 508 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 RASGRF1Q13972 1273 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 RRP1BQ14684 758 aaKnown RBP8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 FAM110CQ1W6H9 321 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 DEFB123Q8N688 67 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 TRIB2Q92519 343 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 GNL3LQ9NVN8 582 aaKnown RBP8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 SLC45A1Q9Y2W3 748 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 COL11A1P12107 1806 aaPredicted RBP8.61□□□□□ -1.03
CHCHD3-206ENST00000496427 PFASO15067 1338 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PLXNA1Q9UIW2 1896 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 HMGCRP04035 888 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 UBTFL1P0CB47 393 aaPredicted RBP8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 RHBDL3P58872 404 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PRR20EP86478 221 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PRR20CP86479 221 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PRR20DP86480 221 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PRR20BP86481 221 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PRR20AP86496 221 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 MAP3K10Q02779 954 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 SPP2Q13103 211 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 SHROOM1Q2M3G4 852 aaPredicted RBP8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 PI16Q6UXB8 463 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 SPRYD3Q8NCJ5 442 aa8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.6□□□□□ -1.03
CHCHD3-206ENST00000496427 COL2A1P02458 1487 aaPredicted RBP8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 DNAH12Q6ZR08 3092 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 SEMA3EO15041 775 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 ANP32CO43423 234 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 CIAO1O76071 339 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 CYP2B6P20813 491 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 TIMM10P62072 90 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 MECOMQ03112 1051 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 ZGPATQ8N5A5 531 aaKnown RBP8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 C11orf49Q9H6J7 331 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 HMX1Q9NP08 348 aaPredicted RBP8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 GJD2Q9UKL4 321 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 EYSQ5T1H1 3165 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 A0A0G2JMZ2 1700 aa8.59□□□□□ -1.03
CHCHD3-206ENST00000496427 RPTORQ8N122 1335 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 A0A1B0GUL7 405 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 BMP8BP34820 402 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 TFCP2Q12800 502 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 TBC1D9Q6ZT07 1266 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 ERICH6Q7L0X2 663 aa8.58□□□□□ -1.04
CHCHD3-206ENST00000496427 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms