RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 RFX7Q2KHR2 1363 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 GOLGA6L3A6NEY3 463 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 SEPT2Q15019 361 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 JAKMIP3Q5VZ66 844 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 CAVIN1Q6NZI2 390 aaKnown RBP10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 ELP3Q9H9T3 547 aa10.84□□□□□ -0.67
GAPVD1-219ENST00000495955 BMP3P12645 472 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 MATR3P43243 847 aaKnown RBP eCLIP10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 ENTPD3O75355 529 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 SLC16A2P36021 539 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 HDLBPQ00341 1268 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 TBC1D10CQ8IV04 446 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 FAM151AQ8WW52 585 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 CALML4Q96GE6 196 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 CCPG1Q9ULG6 757 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 MCM7P33993 719 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 ANKRD35Q8N283 1001 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 STAG1Q8WVM7 1258 aa10.83□□□□□ -0.68
GAPVD1-219ENST00000495955 GPR75-ASB3A0A0A6YYF3 556 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 LETM2Q2VYF4 491 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 FBXO11Q86XK2 927 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 UBA7P41226 1012 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 EPS15P42566 896 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 SPP2Q13103 211 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 TNMDQ9H2S6 317 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 NEDD4P46934 1319 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ADD1P35611 737 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 STAT2P52630 851 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 PANK2Q9BZ23 570 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 COL18A1P39060 1754 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 IGSF3O75054 1194 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 CCNA1P78396 465 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 PIK3AP1Q6ZUJ8 805 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ZNF274Q96GC6 653 aaPredicted RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 LLPHQ9BRT6 129 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 NAT10Q9H0A0 1025 aaKnown RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 VPS54Q9P1Q0 977 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ZNF157P51786 506 aaPredicted RBP10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ME3Q16798 604 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
GAPVD1-219ENST00000495955 NFKBIBQ15653 356 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 ZDHHC15Q96MV8 337 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 ZMYM6O95789 1325 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 DACT2Q5SW24 774 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 C12orf60Q5U649 245 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 SMCO2A6NFE2 343 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 NMT2O60551 498 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 VGLL2Q8N8G2 317 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 PNMA3Q9UL41 463 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 KCNJ14Q9UNX9 436 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 SCN11AQ9UI33 1791 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 JAK2O60674 1132 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 LIG1P18858 919 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 STIM1Q13586 685 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 NECTIN1Q15223 517 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 GPKOWQ92917 476 aaPredicted RBP eCLIP10.81□□□□□ -0.683e-7■■□□□ 12.2
GAPVD1-219ENST00000495955 TPCN1Q9ULQ1 816 aa10.81□□□□□ -0.68
GAPVD1-219ENST00000495955 BMP15O95972 392 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 HUNKP57058 714 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 CICQ96RK0 1608 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 YY1P25490 414 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 KCTD2Q14681 263 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 ALX1Q15699 326 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 MAP1SQ66K74 1059 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 ILDR2Q71H61 639 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 CEP95Q96GE4 821 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 SH2B2O14492 632 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 AKR1B1P15121 316 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 ARHGEF16Q5VV41 709 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 PDILTQ8N807 584 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 INTS4Q96HW7 963 aaKnown RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 PSTPIP2Q9H939 334 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 PCDHA1Q9Y5I3 950 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 BACH1O14867 736 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 TRAK2O60296 914 aa10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 CCNT1O60563 726 aaKnown RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 MARCKSP29966 332 aaPredicted RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
GAPVD1-219ENST00000495955 PLCD1P51178 756 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms