RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 FOXP4Q8IVH2 680 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 LCORLQ8N3X6 602 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 PAGR1Q9BTK6 254 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.435e-40■■□□□ 11.6
SOX2-OT-215ENST00000493521 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 MORF4L1Q9UBU8 362 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
SOX2-OT-215ENST00000493521 CEP290O15078 2479 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 BAZ2AQ9UIF9 1905 aaKnown RBP12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 A0A1W2PRG0 241 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 USP17L10C9JJH3 530 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 TFRCP02786 760 aaKnown RBP12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 PLCG2P16885 1265 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 PDE4AP27815 886 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 COA7Q96BR5 231 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 FLRT1Q9NZU1 646 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 TRIOBPQ9H2D6 2365 aa12.35□□□□□ -0.43
SOX2-OT-215ENST00000493521 SOX1O00570 391 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 IRX3P78415 501 aaPredicted RBP12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 GABPAQ06546 454 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 SEPT2Q15019 361 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 USP6NLQ92738 828 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 AS3MTQ9HBK9 375 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 RLFQ13129 1914 aa12.34□□□□□ -0.43
SOX2-OT-215ENST00000493521 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 CCND3P30281 292 aaPredicted RBP12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 ERVK-24P63145 666 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 MORN1Q5T089 497 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 SERPINB13Q9UIV8 391 aa12.33□□□□□ -0.44
SOX2-OT-215ENST00000493521 COL6A3P12111 3177 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 HMGCRP04035 888 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 VCAM1P19320 739 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 CACNB2Q08289 660 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 MAP3K12Q12852 859 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 MAP3K21Q5TCX8 1036 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 USP17L2Q6R6M4 530 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 DCP1AQ9NPI6 582 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 ZMYND8Q9ULU4 1186 aaPredicted RBP12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 PFASO15067 1338 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 FRMPD3Q5JV73 1810 aa12.32□□□□□ -0.44
SOX2-OT-215ENST00000493521 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 MBD4O95243 580 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 AKR1B1P15121 316 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 SYN1P17600 705 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 CATSPERGQ6ZRH7 1159 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 NPLOC4Q8TAT6 608 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 EHD4Q9H223 541 aa12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 LAMA2P24043 3122 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-215ENST00000493521 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 ADD2P35612 726 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 C7orf61Q8IZ16 206 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 TRPV1Q8NER1 839 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 KIF1BPQ96EK5 621 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 FEZ1Q99689 392 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 RPTORQ8N122 1335 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
SOX2-OT-215ENST00000493521 A0A0G2JMZ2 1700 aa12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 LHX8Q68G74 356 aa12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-215ENST00000493521 HMX1Q9NP08 348 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms