RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ADGRA2	Q96PE1	1338 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	SIPA1L1	O43166	1804 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	MINDY4B	A8MYZ0	360 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	GNRH1	P01148	92 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	USP14	P54578	494 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	SEPT2	Q15019	361 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	IFNL3	Q8IZI9	196 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	ZNF287	Q9HBT7	754 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	HELLS	Q9NRZ9	838 aa		13.25	□□□□□ -0.29
GGA1-222	ENST00000489772	SMIM22	K7EJ46	135 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	BCR	P11274	1271 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	AKR1B1	P15121	316 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	HOXA7	P31268	230 aa	Predicted RBP	13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	GUCY1A2	P33402	732 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	GCLC	P48506	637 aa	Predicted RBP	13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	IRX3	P78415	501 aa	Predicted RBP	13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	ACER1	Q8TDN7	264 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	CDK5RAP2	Q96SN8	1893 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	ARHGAP39	Q9C0H5	1083 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	KIAA1683	Q9H0B3	1180 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	NAPB	Q9H115	298 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	MKNK2	Q9HBH9	465 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	EMILIN3	Q9NT22	766 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	PTPN22	Q9Y2R2	807 aa		13.24	□□□□□ -0.29
GGA1-222	ENST00000489772	DDX60L	Q5H9U9	1706 aa	Known RBP	13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	FMNL1	O95466	1100 aa	Predicted RBP	13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	SLC3A2	P08195	630 aa	Known RBP	13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	PSMC4	P43686	418 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	FCGRT	P55899	365 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	CAP1	Q01518	475 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	ZYX	Q15942	572 aa	Known RBP	13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	MCMDC2	Q4G0Z9	681 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	ANKRD13C	Q8N6S4	541 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	C12orf42	Q96LP6	360 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	NAV1	Q8NEY1	1877 aa		13.23	□□□□□ -0.29
GGA1-222	ENST00000489772	MYH1	P12882	1939 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	ECM2	O94769	699 aa	Predicted RBP	13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	HOXD10	P28358	340 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	PRMT2	P55345	433 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	ICA1	Q05084	483 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	CCDC129	Q6ZRS4	1044 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	STK11IP	Q8N1F8	1099 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	FAM227B	Q96M60	508 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	SH2D4A	Q9H788	454 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	KANSL2	Q9H9L4	492 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	ARHGEF10L	Q9HCE6	1279 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772	ROBO3	Q96MS0	1386 aa		13.22	□□□□□ -0.29
GGA1-222	ENST00000489772		A0A0D9SFI3	127 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L15	C9J2P7	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L13	C9JLJ4	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L11	C9JVI0	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L18	D6R9N7	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L22	D6RA61	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L17	D6RBQ6	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L19	D6RCP7	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L20	D6RJB6	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	HIP1	O00291	1037 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	VCAM1	P19320	739 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	SDS	P20132	328 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L24	Q0WX57	530 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	NMI	Q13287	307 aa	Predicted RBP	13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	FAM110C	Q1W6H9	321 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	TRIM47	Q96LD4	638 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	P2RX7	Q99572	595 aa	Known RBP	13.21	□□□□□ -0.29
GGA1-222	ENST00000489772	PHIP	Q8WWQ0	1821 aa		13.21	□□□□□ -0.29
GGA1-222	ENST00000489772		A0A1W2PRG0	241 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	PDE4A	P27815	886 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	CTGF	P29279	349 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	MFAP1	P55081	439 aa	Known RBP	13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	HERVK_113	P62684	666 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	PDE4B	Q07343	736 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	PPARA	Q07869	468 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	DIAPH3	Q9NSV4	1193 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	SRRD	Q9UH36	339 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	TNPO2	O14787	897 aa	Known RBP	13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	RASA1	P20936	1047 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	ATP2B2	Q01814	1243 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	VPS53	Q5VIR6	699 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	CATSPERG	Q6ZRH7	1159 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	SIAH1	Q8IUQ4	282 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	GPRC5A	Q8NFJ5	357 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	LPAR1	Q92633	364 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	TMX2	Q9Y320	296 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	PTCH2	Q9Y6C5	1203 aa		13.2	□□□□□ -0.3
GGA1-222	ENST00000489772	MYH7	P12883	1935 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	CCDC171	Q6TFL3	1326 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	MYPN	Q86TC9	1320 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	FOXP2	O15409	715 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	PRDM1	O75626	825 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	EEF2	P13639	858 aa	Known RBP	13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	ALX1	Q15699	326 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	SLC9C1	Q4G0N8	1177 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	TTC22	Q5TAA0	569 aa		13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	CWC27	Q6UX04	472 aa	Known RBP	13.19	□□□□□ -0.3
GGA1-222	ENST00000489772	NBPF11	Q86T75	865 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms