RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 VPS37DQ86XT2 251 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 PLD6Q8N2A8 252 aaKnown RBP6.48□□□□□ -1.37
SSR1-209ENST00000488834 CPLX3Q8WVH0 158 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 HEXIM2Q96MH2 286 aaKnown RBP6.48□□□□□ -1.37
SSR1-209ENST00000488834 KIF2CQ99661 725 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 CAPN10Q9HC96 672 aa6.48□□□□□ -1.37
SSR1-209ENST00000488834 SLC22A31A6NKX4 558 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 OXCT1P55809 520 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 RAD51AP2Q09MP3 1159 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 COL9A2Q14055 689 aaPredicted RBP6.47□□□□□ -1.37
SSR1-209ENST00000488834 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
SSR1-209ENST00000488834 MSMPQ1L6U9 139 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 MFSD4AQ8N468 514 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
SSR1-209ENST00000488834 COX4I2Q96KJ9 171 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 MKNK2Q9HBH9 465 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 PPT2Q9UMR5 302 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
SSR1-209ENST00000488834 TMEM265A0A087WTH1 108 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 DNAJA2O60884 412 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 CDKAL1Q5VV42 579 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 CCDC81Q6ZN84 652 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 NLRC3Q7RTR2 1065 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 VSIG10LQ86VR7 867 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 DTX1Q86Y01 620 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 TMEM40Q8WWA1 233 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 HRASLS5Q96KN8 279 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 SLC5A6Q9Y289 635 aa6.46□□□□□ -1.38
SSR1-209ENST00000488834 KIAA1324LA8MWY0 1029 aaPredicted RBP6.45□□□□□ -1.38
SSR1-209ENST00000488834 WNT11O96014 354 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 SPINK2P20155 84 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 KIR3DL1P43629 444 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 GJA8P48165 433 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 NASPP49321 788 aaPredicted RBP6.45□□□□□ -1.38
SSR1-209ENST00000488834 FAM214BQ7L5A3 538 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 FLCNQ8NFG4 579 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 ATG4CQ96DT6 458 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 ANTXR1Q9H6X2 564 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 U3KQE9 123 aa6.45□□□□□ -1.38
SSR1-209ENST00000488834 FAM86C2PA6NEL3 165 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 PRR33A8MZF0 331 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 RGS13O14921 159 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 AOC3Q16853 763 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 TP53INP2Q8IXH6 220 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 RASGRP4Q8TDF6 673 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 CCDC39Q9UFE4 941 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 KCNH3Q9ULD8 1083 aa6.44□□□□□ -1.38
SSR1-209ENST00000488834 NME1P15531 152 aaKnown RBP6.43□□□□□ -1.38
SSR1-209ENST00000488834 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
SSR1-209ENST00000488834 SOX9P48436 509 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 CLCN7P51798 805 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
SSR1-209ENST00000488834 RNF4P78317 190 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 CDCP2Q5VXM1 449 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 PPP1R13LQ8WUF5 828 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 RNF141Q8WVD5 230 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 SEC16BQ96JE7 1060 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 KREMEN1Q96MU8 473 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 SRRTQ9BXP5 876 aaKnown RBP6.43□□□□□ -1.38
SSR1-209ENST00000488834 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.43□□□□□ -1.38
SSR1-209ENST00000488834 CNNM2Q9H8M5 875 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 PLAGL2Q9UPG8 496 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 CAPN6Q9Y6Q1 641 aa6.43□□□□□ -1.38
SSR1-209ENST00000488834 MEIS3P2A8K0S8 358 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
SSR1-209ENST00000488834 H3BS24 57 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 CLEC3AO75596 197 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 SSBP05455 408 aaKnown RBP eCLIP6.42□□□□□ -1.38
SSR1-209ENST00000488834 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
SSR1-209ENST00000488834 PRKCQQ04759 706 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 NKPD1Q17RQ9 610 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 C22orf34Q6ZV56 151 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 SPACA3Q8IXA5 215 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 ASB11Q8WXH4 323 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 FBXL18Q96ME1 805 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 HSPA12BQ96MM6 686 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 TM9SF2Q99805 663 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 ASPNQ9BXN1 380 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 ASCC2Q9H1I8 757 aaPredicted RBP6.42□□□□□ -1.38
SSR1-209ENST00000488834 VAV3Q9UKW4 847 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 CNTNAP4Q9C0A0 1308 aa6.42□□□□□ -1.38
SSR1-209ENST00000488834 PRNPP04156 253 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 CCNFP41002 786 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 BNIP3Q12983 259 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 IKZF1Q13422 519 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 PIWIL2Q8TC59 973 aaKnown RBP6.41□□□□□ -1.38
SSR1-209ENST00000488834 BCL7CQ8WUZ0 217 aaPredicted RBP6.41□□□□□ -1.38
SSR1-209ENST00000488834 DHRS1Q96LJ7 313 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 TNKS2Q9H2K2 1166 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 TRIT1Q9H3H1 467 aaKnown RBP6.41□□□□□ -1.38
SSR1-209ENST00000488834 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
SSR1-209ENST00000488834 UBOX5O94941 541 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms