RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 POLR3DP05423 398 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-206ENST00000484733 ATP5JP18859 108 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 Q3C1V9 767 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 CATSPERGQ6ZRH7 1159 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 HMX1Q9NP08 348 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-206ENST00000484733 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 NR2E3Q9Y5X4 410 aa13.89□□□□□ -0.19
SCFD1-206ENST00000484733 GOLIM4O00461 696 aa13.88□□□□□ -0.19
SCFD1-206ENST00000484733 FXR1P51114 621 aaKnown RBP eCLIP13.88□□□□□ -0.19
SCFD1-206ENST00000484733 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
SCFD1-206ENST00000484733 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
SCFD1-206ENST00000484733 POTEEQ6S8J3 1075 aa13.88□□□□□ -0.19
SCFD1-206ENST00000484733 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 MORN1Q5T089 497 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
SCFD1-206ENST00000484733 CNMDO75829 334 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 RAB3GAP1Q15042 981 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 TRIB2Q92519 343 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 FEZ1Q99689 392 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 HAUS7Q99871 368 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 DCP1AQ9NPI6 582 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-206ENST00000484733 PAG1Q9NWQ8 432 aa13.87□□□□□ -0.19
SCFD1-206ENST00000484733 CYP2B6P20813 491 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 ADD2P35612 726 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 NECAB2Q7Z6G3 386 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 ACER1Q8TDN7 264 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 PRO3102Q9H379 93 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 APBB1O00213 710 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 PEX10O60683 326 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 RGS2P41220 211 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 CCNA1P78396 465 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 TRIM32Q13049 653 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 LCORLQ8N3X6 602 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 PORCNQ9H237 461 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 OGDHLQ9ULD0 1010 aa13.86□□□□□ -0.19
SCFD1-206ENST00000484733 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
SCFD1-206ENST00000484733 VCAM1P19320 739 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.85□□□□□ -0.193e-9■■□□□ 13.6
SCFD1-206ENST00000484733 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
SCFD1-206ENST00000484733 SEPT2Q15019 361 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 UBE3CQ15386 1083 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
SCFD1-206ENST00000484733 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 CCAR1Q8IX12 1150 aaKnown RBP13.85□□□□□ -0.19
SCFD1-206ENST00000484733 PAWRQ96IZ0 340 aaKnown RBP13.85□□□□□ -0.19
SCFD1-206ENST00000484733 BOLA2Q9H3K6 86 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 BRCA2P51587 3418 aa13.85□□□□□ -0.19
SCFD1-206ENST00000484733 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
SCFD1-206ENST00000484733 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
SCFD1-206ENST00000484733 MAP2K5Q13163 448 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 EDC3Q96F86 508 aaKnown RBP13.84□□□□□ -0.19
SCFD1-206ENST00000484733 APBA2Q99767 749 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 EVI5O60447 810 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 TMEM179Q6ZVK1 233 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 LRRCC1Q9C099 1032 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 ARMT1Q9H993 441 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 MYH7P12883 1935 aa13.84□□□□□ -0.19
SCFD1-206ENST00000484733 ALPK3Q96L96 1907 aa13.83□□□□□ -0.2
SCFD1-206ENST00000484733 PRKAR2AP13861 404 aaKnown RBP13.83□□□□□ -0.2
SCFD1-206ENST00000484733 ZSCAN25Q6NSZ9 544 aa13.83□□□□□ -0.2
SCFD1-206ENST00000484733 RPAP3Q9H6T3 665 aaPredicted RBP13.83□□□□□ -0.2
SCFD1-206ENST00000484733 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
SCFD1-206ENST00000484733 A0A1W2PPC1 479 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 A0A1W2PRG0 241 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
SCFD1-206ENST00000484733 MBD4O95243 580 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 PTPREP23469 700 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 EVX2Q03828 476 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
SCFD1-206ENST00000484733 DIS3LQ8TF46 1054 aaKnown RBP13.82□□□□□ -0.2
SCFD1-206ENST00000484733 CCDC17Q96LX7 622 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 NBPF3Q9H094 633 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 HOXC10Q9NYD6 342 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 BTBD7Q9P203 1132 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 HOXC6P09630 235 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 CYP2D6P10635 497 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 COG2Q14746 738 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 MYH8P13535 1937 aa13.82□□□□□ -0.2
SCFD1-206ENST00000484733 MPHOSPH10O00566 681 aaKnown RBP13.81□□□□□ -0.2
SCFD1-206ENST00000484733 PRKAB2O43741 272 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 C20orf194Q5TEA3 1177 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 LPAR1Q92633 364 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 C11orf49Q9H6J7 331 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
SCFD1-206ENST00000484733 A0A0G2JMZ2 1700 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 RLFQ13129 1914 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 IGHA2P01877 340 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 GRB14Q14449 540 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 CCL14Q16627 93 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 LHX8Q68G74 356 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms