RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 FAM196BA6NMK8 535 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 POTECB2RU33 542 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 LARGE1O95461 756 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 TTLL1O95922 423 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 TOP1P11387 765 aaKnown RBP17.08■□□□□ 0.32
PCCB-215ENST00000482086 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.32
PCCB-215ENST00000482086 STK3Q13188 491 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 EAPPQ56P03 285 aaPredicted RBP17.08■□□□□ 0.32
PCCB-215ENST00000482086 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
PCCB-215ENST00000482086 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 ZNF654Q8IZM8 581 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 MAP3K14Q99558 947 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 ZNF341Q9BYN7 854 aa17.08■□□□□ 0.32
PCCB-215ENST00000482086 NID2Q14112 1375 aa17.07■□□□□ 0.32
PCCB-215ENST00000482086 NMT2O60551 498 aa17.07■□□□□ 0.32
PCCB-215ENST00000482086 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
PCCB-215ENST00000482086 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
PCCB-215ENST00000482086 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
PCCB-215ENST00000482086 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 CDKL5O76039 1030 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 ASNSP08243 561 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 SCRN1Q12765 414 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCCB-215ENST00000482086 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 RBM28Q9NW13 759 aaKnown RBP17.06■□□□□ 0.32
PCCB-215ENST00000482086 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 SYNPO2Q9UMS6 1093 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 SMC3Q9UQE7 1217 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
PCCB-215ENST00000482086 CPLX1O14810 134 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
PCCB-215ENST00000482086 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
PCCB-215ENST00000482086 KIF5BP33176 963 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 NF2P35240 595 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 CAP2P40123 477 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 MICU3Q86XE3 530 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
PCCB-215ENST00000482086 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
PCCB-215ENST00000482086 PHF20L1A8MW92 1017 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 GDF11O95390 407 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 GH2P01242 217 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 GNAQP50148 359 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 CCT2P78371 535 aaKnown RBP17.04■□□□□ 0.32
PCCB-215ENST00000482086 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
PCCB-215ENST00000482086 RTN1Q16799 776 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 CTCFLQ8NI51 663 aaPredicted RBP17.04■□□□□ 0.32
PCCB-215ENST00000482086 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 MKL1Q969V6 931 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 ZNF112Q9UJU3 913 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 ZBTB21Q9ULJ3 1066 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
PCCB-215ENST00000482086 SLURP2P0DP57 97 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 ICA1Q05084 483 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 TROAPQ12815 778 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 SEPT2Q15019 361 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 ARHGEF10LQ9HCE6 1279 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 CLIP2Q9UDT6 1046 aa17.04■□□□□ 0.32
PCCB-215ENST00000482086 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
PCCB-215ENST00000482086 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
PCCB-215ENST00000482086 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
PCCB-215ENST00000482086 SH2D4AQ9H788 454 aa17.03■□□□□ 0.32
PCCB-215ENST00000482086 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
PCCB-215ENST00000482086 MYH6P13533 1939 aa17.03■□□□□ 0.32
PCCB-215ENST00000482086 EEF2P13639 858 aaKnown RBP17.02■□□□□ 0.31
PCCB-215ENST00000482086 GUCY1A2P33402 732 aa17.02■□□□□ 0.31
PCCB-215ENST00000482086 ST3GAL1Q11201 340 aa17.02■□□□□ 0.31
PCCB-215ENST00000482086 RRP1BQ14684 758 aaKnown RBP17.02■□□□□ 0.31
PCCB-215ENST00000482086 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.31
PCCB-215ENST00000482086 MYL10Q9BUA6 226 aa17.02■□□□□ 0.31
PCCB-215ENST00000482086 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.31
PCCB-215ENST00000482086 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 IFNAR1P17181 557 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 PDCP20941 246 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 GJB2P29033 226 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
PCCB-215ENST00000482086 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 GRM4Q14833 912 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 PRAMEF18Q5VWM3 479 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
PCCB-215ENST00000482086 CDCA5Q96FF9 252 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 WRNIP1Q96S55 665 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 LZTS2Q9BRK4 669 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 CHMP5Q9NZZ3 219 aa17.01■□□□□ 0.31
PCCB-215ENST00000482086 RXRAP19793 462 aa17■□□□□ 0.31
PCCB-215ENST00000482086 IREB2P48200 963 aaKnown RBP17■□□□□ 0.31
PCCB-215ENST00000482086 ASPRV1Q53RT3 343 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms