RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
SNRNP200-203ENST00000480242 CAMKK2Q96RR4 588 aa9.63□□□□□ -0.87
SNRNP200-203ENST00000480242 SEC62Q99442 399 aaKnown RBP9.63□□□□□ -0.87
SNRNP200-203ENST00000480242 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
SNRNP200-203ENST00000480242 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 CCDC196A0A1B0GTZ2 297 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 H0YHG0 523 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 CUTAO60888 179 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 FGFR2P21802 821 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 CCT2P78371 535 aaKnown RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 SF3B3Q15393 1217 aaKnown RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 KIF4BQ2VIQ3 1234 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 GBP6Q6ZN66 633 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 Q6ZUG5 572 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 FMR1NBQ8N0W7 255 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 ABCF2Q9UG63 623 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 USP8P40818 1118 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 SETQ01105 290 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 STK38Q15208 465 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 TTC39AQ5SRH9 613 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 CHST3Q7LGC8 479 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 RIN2Q8WYP3 895 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 ACBD3Q9H3P7 528 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 LRRIQ3A6PVS8 624 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 CBFA2T2O43439 604 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 SIK1P57059 783 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 NLRP12P59046 1061 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 FAM169AQ9Y6X4 670 aa9.62□□□□□ -0.87
SNRNP200-203ENST00000480242 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 A0A0D9SFI3 127 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 GOLGA6L9A6NEM1 432 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 EBAG9O00559 213 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 TAF5LO75529 589 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 MTF1Q14872 753 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 KCNV1Q6PIU1 500 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 HNRNPLLQ8WVV9 542 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 HLFQ16534 295 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 RRP12Q5JTH9 1297 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 ATG9AQ7Z3C6 839 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 VSTM4Q8IW00 320 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 MRPL44Q9H9J2 332 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 NIP7Q9Y221 180 aaKnown RBP eCLIP9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
SNRNP200-203ENST00000480242 ATAD5Q96QE3 1844 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 INPP5BP32019 993 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 SCRN1Q12765 414 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 FAM107BQ9H098 131 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 ZNF219Q9P2Y4 722 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 A0A0U1RQJ8 604 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 PARP10Q53GL7 1025 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 ZNF569Q5MCW4 686 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 OTUD7BQ6GQQ9 843 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 FCHSD1Q86WN1 690 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 TMEM139Q8IV31 216 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 CEP112Q8N8E3 955 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 ATRIPQ8WXE1 791 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 EVI5LQ96CN4 794 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 EHD4Q9H223 541 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 CAPN7Q9Y6W3 813 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 EP400Q96L91 3159 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 ZNF202O95125 648 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 TTC19Q6DKK2 380 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 CPLX2Q6PUV4 134 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 FBXL16Q8N461 479 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 IGSF22Q8N9C0 903 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 NCOA5Q9HCD5 579 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 CDC23Q9UJX2 597 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 SAMM50Q9Y512 469 aa9.6□□□□□ -0.87
SNRNP200-203ENST00000480242 SCN9AQ15858 1988 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 PTPDC1A2A3K4 754 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 ATP2B2Q01814 1243 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 PI16Q6UXB8 463 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 IRS4O14654 1257 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 USP5P45974 858 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 ZNF589Q86UQ0 364 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 CPLX3Q8WVH0 158 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 BPIFA3Q9BQP9 254 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 RAB21Q9UL25 225 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 CCDC189A1A4V9 331 aa9.59□□□□□ -0.87
SNRNP200-203ENST00000480242 KIF5CO60282 957 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms