RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 USP16Q9Y5T5 823 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 U3KPZ7 1027 aaPredicted RBP12.12□□□□□ -0.47
EWSR1-216ENST00000479135 ELF2Q15723 593 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 THEGQ9P2T0 379 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 TSR3Q9UJK0 312 aaKnown RBP12.12□□□□□ -0.47
EWSR1-216ENST00000479135 MAPK8IP1Q9UQF2 711 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 SORBS3O60504 671 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 STX1BP61266 288 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 GNGT1P63211 74 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 MED4Q9NPJ6 270 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 OATP04181 439 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 CDC37Q16543 378 aaPredicted RBP12.12□□□□□ -0.47
EWSR1-216ENST00000479135 C11orf74Q86VG3 221 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 MRGBPQ9NV56 204 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 CAVIN4Q5BKX8 364 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 HACD3Q9P035 362 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 DENND2CQ68D51 928 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 CCDC105Q8IYK2 499 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
EWSR1-216ENST00000479135 CUX1P39880 1505 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 PCP4L1A6NKN8 68 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 STX10O60499 249 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ARHGAP25P42331 645 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 KRT83P78385 493 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 BFSP1Q12934 665 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 SCAND2PQ9GZW5 306 aaPredicted RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ZNF287Q9HBT7 754 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ADCY3O60266 1144 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 KRT19P08727 400 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 TRPC1P48995 793 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 BASP1P80723 227 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 SCYL2Q6P3W7 929 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ARL10Q8N8L6 244 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 TAF11Q15544 211 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ST13P5Q8NFI4 369 aaPredicted RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 ATP11BQ9Y2G3 1177 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 DTNBO60941 627 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 KRT32Q14532 448 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 RYBPQ8N488 228 aaPredicted RBP12.11□□□□□ -0.47
EWSR1-216ENST00000479135 MTRQ99707 1265 aa12.11□□□□□ -0.47
EWSR1-216ENST00000479135 AGRPO00253 132 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SLC9A1P19634 815 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 KAZNQ674X7 775 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SLC38A10Q9HBR0 1119 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 CCDC124Q96CT7 223 aaKnown RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 TSC22D3Q99576 134 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 USP47Q96K76 1375 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 ZNF263O14978 683 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 LMNB1P20700 586 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 AP2B1P63010 937 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 CAPRIN1Q14444 709 aaKnown RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 UBN1Q9NPG3 1134 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SLC13A4Q9UKG4 626 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 DAB1O75553 588 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 ATF3P18847 181 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 NFRKBQ6P4R8 1299 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 FBXL5Q9UKA1 691 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SART1O43290 800 aaKnown RBP12.1□□□□□ -0.47
EWSR1-216ENST00000479135 NBPF9Q3BBW0 867 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 EXT2Q93063 718 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 CARD6Q9BX69 1037 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
EWSR1-216ENST00000479135 TCF3P15923 654 aa12.09□□□□□ -0.47
EWSR1-216ENST00000479135 OCA2Q04671 838 aa12.09□□□□□ -0.47
EWSR1-216ENST00000479135 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
EWSR1-216ENST00000479135 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
EWSR1-216ENST00000479135 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
EWSR1-216ENST00000479135 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
EWSR1-216ENST00000479135 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms