RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ANKRD13CQ8N6S4 541 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 FEZ1Q99689 392 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 ASCC2Q9H1I8 757 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-221ENST00000477561 STAP2Q9UGK3 403 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
HDAC6-221ENST00000477561 DDX60LQ5H9U9 1706 aaKnown RBP9.93□□□□□ -0.82
HDAC6-221ENST00000477561 PTPRFP10586 1907 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 MYH7P12883 1935 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 MINDY4BA8MYZ0 360 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 AKR1B1P15121 316 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 CDK8P49336 464 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 IRX3P78415 501 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-221ENST00000477561 PABPC4Q13310 644 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-221ENST00000477561 LRRFIP1Q32MZ4 808 aaKnown RBP9.92□□□□□ -0.82
HDAC6-221ENST00000477561 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 CHD1LQ86WJ1 897 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 CLEC10AQ8IUN9 316 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 P2RX7Q99572 595 aaKnown RBP9.92□□□□□ -0.82
HDAC6-221ENST00000477561 SWAP70Q9UH65 585 aa9.92□□□□□ -0.82
HDAC6-221ENST00000477561 HTTP42858 3142 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 PATL2C9JE40 543 aaKnown RBP9.91□□□□□ -0.82
HDAC6-221ENST00000477561 TDO2P48775 406 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 FCGRTP55899 365 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 NUCB1Q02818 461 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 SLC9C1Q4G0N8 1177 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 ZMYM1Q5SVZ6 1142 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 C16orf86Q6ZW13 317 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 CENPQQ7L2Z9 268 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-221ENST00000477561 SH3TC2Q8TF17 1288 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 EPB41L4AQ9HCS5 686 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-221ENST00000477561 SRRDQ9UH36 339 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
HDAC6-221ENST00000477561 BAZ2AQ9UIF9 1905 aaKnown RBP9.91□□□□□ -0.82
HDAC6-221ENST00000477561 MYPNQ86TC9 1320 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 A0A1W2PRG0 241 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 TNPO2O14787 897 aaKnown RBP9.9□□□□□ -0.82
HDAC6-221ENST00000477561 GNRH1P01148 92 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 HOXD10P28358 340 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 HOXA7P31268 230 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-221ENST00000477561 GCLCP48506 637 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-221ENST00000477561 RGS19P49795 217 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 ATP2B2Q01814 1243 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 MLLT1Q03111 559 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-221ENST00000477561 PRKCZQ05513 592 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 TMEM179Q6ZVK1 233 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 IFNL3Q8IZI9 196 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 RAET1EQ8TD07 263 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 KIAA1683Q9H0B3 1180 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 ARPP21Q9UBL0 812 aaPredicted RBP9.9□□□□□ -0.82
HDAC6-221ENST00000477561 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 LOC285556D6RIA3 1793 aa9.9□□□□□ -0.82
HDAC6-221ENST00000477561 CENPFP49454 3210 aa9.9□□□□□ -0.83
HDAC6-221ENST00000477561 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L15C9J2P7 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L13C9JLJ4 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L11C9JVI0 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L18D6R9N7 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L22D6RA61 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L17D6RBQ6 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L19D6RCP7 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L20D6RJB6 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 PRDM1O75626 825 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 GNAT2P19087 354 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 VCAM1P19320 739 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP14P54578 494 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 HERVK_113P62684 666 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 USP17L24Q0WX57 530 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 FAM110CQ1W6H9 321 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 SBK1Q52WX2 424 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 KIAA1755Q5JYT7 1200 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 GIMAP6Q6P9H5 292 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 NBPF11Q86T75 865 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 SIAH1Q8IUQ4 282 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 ARMC5Q96C12 935 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 ZNF333Q96JL9 665 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 C12orf42Q96LP6 360 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 PAGR1Q9BTK6 254 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 MKNK2Q9HBH9 465 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 TXNRD2Q9NNW7 524 aa9.89□□□□□ -0.83
HDAC6-221ENST00000477561 EEF2P13639 858 aaKnown RBP9.88□□□□□ -0.83
HDAC6-221ENST00000477561 FLT3LGP49771 235 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 PRMT2P55345 433 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 ICA1Q05084 483 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 Q3C1V9 767 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 VPS53Q5VIR6 699 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 POTEEQ6S8J3 1075 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 CATSPERGQ6ZRH7 1159 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 SPICE1Q8N0Z3 855 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 CCDC17Q96LX7 622 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 NAPBQ9H115 298 aa9.88□□□□□ -0.83
HDAC6-221ENST00000477561 RPAP3Q9H6T3 665 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-221ENST00000477561 ARHGEF10LQ9HCE6 1279 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms