RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TNKS2Q9H2K2 1166 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 NLRC4Q9NPP4 1024 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 LUC7LQ9NQ29 371 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 KLK14Q9P0G3 267 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 FOXD3Q9UJU5 478 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 PNMA8BQ9ULN7 279 aaPredicted RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 PDZRN3Q9UPQ7 1066 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 LUC7L2Q9Y383 392 aaKnown RBP3.5□□□□□ -1.85
HMGN4-202ENST00000477243 SLC12A7Q9Y666 1083 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 FAM135BQ49AJ0 1406 aa3.5□□□□□ -1.85
HMGN4-202ENST00000477243 WASHC2AQ641Q2 1341 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 POLA1P09884 1462 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 A6NHS1 94 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 C9IYK1 514 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 F6X3S4 739 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 AGRPO00253 132 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 GPR39O43194 453 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 FIBPO43427 364 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ORC4O43929 436 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 HIP1RO75146 1068 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 FBXO21O94952 628 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 VCAM1P19320 739 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 CCND1P24385 295 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 CYP2C19P33261 490 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 CCNFP41002 786 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 GJA9P57773 515 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 MAP3K10Q02779 954 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 FAPQ12884 760 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TBX2Q13207 712 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 MPP2Q14168 576 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 NCAPHQ15003 741 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 CDC37Q16543 378 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 SYDE2Q5VT97 1194 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 NBPF10Q6P3W6 841 aaKnown RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 CNNM4Q6P4Q7 775 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 C1orf228Q6PIY5 440 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 AGMOQ6ZNB7 445 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 GET4Q7L5D6 327 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TRIM42Q8IWZ5 723 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ZNF511Q8NB15 262 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 NGDNQ8NEJ9 315 aaKnown RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 LEO1Q8WVC0 666 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 SLC7A3Q8WY07 619 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 FOXJ1Q92949 421 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 GJA10Q969M2 543 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TRIM63Q969Q1 353 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 L3MBTL2Q969R5 705 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 XAGE2Q96GT9 111 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TRERF1Q96PN7 1200 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TRIM56Q9BRZ2 755 aaKnown RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ESYT1Q9BSJ8 1104 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 DHRS4Q9BTZ2 278 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TARS2Q9BW92 718 aaKnown RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 EHD4Q9H223 541 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ELP3Q9H9T3 547 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 LGR6Q9HBX8 967 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 NCOA5Q9HCD5 579 aaKnown RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 TCF7L1Q9HCS4 588 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 C9orf78Q9NZ63 289 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 EVLQ9UI08 416 aaPredicted RBP3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ZNRF3Q9ULT6 936 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 SRPK3Q9UPE1 567 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 AKAP2Q9Y2D5 859 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 ANKRD6Q9Y2G4 727 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 STXBP5LQ9Y2K9 1186 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 IPPQ9Y573 584 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 PCDHB3Q9Y5E6 796 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 UNC13BO14795 1591 aa3.49□□□□□ -1.85
HMGN4-202ENST00000477243 POGZQ7Z3K3 1410 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 FAM170AA1A519 330 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CBFA2T2O43439 604 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 ZEB2O60315 1214 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 SNUPNO95149 360 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 SETSIPP0DME0 302 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CRKP46108 304 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 TERF1P54274 439 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 AK2P54819 239 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 FCGRTP55899 365 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 STRN3Q13033 797 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 TCIRG1Q13488 830 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MLECQ14165 292 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 GBX1Q14549 363 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CBX2Q14781 532 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 PDCD2Q16342 344 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 LRRFIP1Q32MZ4 808 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 KRTAP21-3Q3LHN1 58 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 PRR16Q569H4 304 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 JAKMIP3Q5VZ66 844 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 PTCRAQ6ISU1 281 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MZT2AQ6P582 158 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CFAP161Q6P656 301 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CASC1Q6TDU7 716 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 C6orf15Q6UXA7 325 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 DTHD1Q6ZMT9 781 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 MYLK4Q86YV6 388 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 FAM186BQ8IYM0 893 aa3.48□□□□□ -1.85
HMGN4-202ENST00000477243 CLASRPQ8N2M8 674 aaKnown RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 FAM160A2Q8N612 972 aaPredicted RBP3.48□□□□□ -1.85
HMGN4-202ENST00000477243 ATXN2LQ8WWM7 1075 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms