RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
LSM2-212ENST00000477182 SPATA5Q8NB90 893 aa13.93□□□□□ -0.18
LSM2-212ENST00000477182 ATXN2LQ8WWM7 1075 aaKnown RBP13.93□□□□□ -0.18
LSM2-212ENST00000477182 EDC3Q96F86 508 aaKnown RBP13.93□□□□□ -0.18
LSM2-212ENST00000477182 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
LSM2-212ENST00000477182 DENND2AQ9ULE3 1009 aa13.93□□□□□ -0.18
LSM2-212ENST00000477182 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
LSM2-212ENST00000477182 GOLIM4O00461 696 aa13.92□□□□□ -0.18
LSM2-212ENST00000477182 SEMA3EO15041 775 aa13.92□□□□□ -0.18
LSM2-212ENST00000477182 CCND3P30281 292 aaPredicted RBP13.92□□□□□ -0.18
LSM2-212ENST00000477182 RGS2P41220 211 aa13.92□□□□□ -0.18
LSM2-212ENST00000477182 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 MSCO60682 206 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 LDHBP07195 334 aaKnown RBP13.91□□□□□ -0.18
LSM2-212ENST00000477182 MAPK4P31152 587 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 SPP2Q13103 211 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 CCAR1Q8IX12 1150 aaKnown RBP13.91□□□□□ -0.18
LSM2-212ENST00000477182 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 GPRC5AQ8NFJ5 357 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 ANTXR1Q9H6X2 564 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
LSM2-212ENST00000477182 NCOR1O75376 2440 aa13.91□□□□□ -0.18
LSM2-212ENST00000477182 ZBTB22O15209 634 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 TBC1D12O60347 775 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 CYP2E1P05181 493 aaPredicted RBP13.9□□□□□ -0.18
LSM2-212ENST00000477182 SDSP20132 328 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
LSM2-212ENST00000477182 HMGCS2P54868 508 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 RTP1P59025 263 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
LSM2-212ENST00000477182 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 APBA2Q99767 749 aa13.9□□□□□ -0.18
LSM2-212ENST00000477182 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
LSM2-212ENST00000477182 PIH1D3Q9NQM4 214 aaKnown RBP13.9□□□□□ -0.18
LSM2-212ENST00000477182 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.19
LSM2-212ENST00000477182 DNM1LO00429 736 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 PRDX5P30044 214 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 SH3BP5LQ7L8J4 393 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
LSM2-212ENST00000477182 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 LPAR1Q92633 364 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 USP6NLQ92738 828 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
LSM2-212ENST00000477182 ATP11BQ9Y2G3 1177 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 MYH2Q9UKX2 1941 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 SYNGAP1Q96PV0 1343 aa13.89□□□□□ -0.19
LSM2-212ENST00000477182 DDTLA6NHG4 134 aaPredicted RBP13.88□□□□□ -0.19
LSM2-212ENST00000477182 MFSD14CQ5VZR4 134 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 IL27Q8NEV9 243 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 ADAMTS19Q8TE59 1207 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 BADQ92934 168 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 PRDM5Q9NQX1 630 aaPredicted RBP13.88□□□□□ -0.19
LSM2-212ENST00000477182 ABCF2Q9UG63 623 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 DDX20Q9UHI6 824 aaKnown RBP13.88□□□□□ -0.19
LSM2-212ENST00000477182 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
LSM2-212ENST00000477182 RFX7Q2KHR2 1363 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 USP17L5A8MUK1 530 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 GRIN2CQ14957 1233 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 CCL14Q16627 93 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 MORN1Q5T089 497 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 PLEKHH3Q7Z736 793 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 SLF2Q8IX21 1173 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 KBTBD3Q8NAB2 608 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
LSM2-212ENST00000477182 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
LSM2-212ENST00000477182 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 ATAD5Q96QE3 1844 aa13.87□□□□□ -0.19
LSM2-212ENST00000477182 RLFQ13129 1914 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 IDH1O75874 414 aaKnown RBP13.86□□□□□ -0.19
LSM2-212ENST00000477182 HERVK_113P62684 666 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 MRPS5P82675 430 aaKnown RBP13.86□□□□□ -0.19
LSM2-212ENST00000477182 SLC39A5Q6ZMH5 540 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
LSM2-212ENST00000477182 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 LRP2BPQ9P2M1 347 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 GAKO14976 1311 aa13.86□□□□□ -0.19
LSM2-212ENST00000477182 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 CNGA1P29973 690 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 ERVK-9P63128 1117 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 ERVK-24P63145 666 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 PICALMQ13492 652 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 ERICH6Q7L0X2 663 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms