RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IKBKBO14920 756 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 GPTP24298 496 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 GJC1P36383 396 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
U2AF1-209ENST00000475639 MIEF2Q96C03 454 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 SEPT10Q9P0V9 454 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 ERCC3P19447 782 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC25Q86WR0 208 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
U2AF1-209ENST00000475639 FAM76AQ8TAV0 307 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 FAXDC2Q96IV6 333 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 VCXQ9H320 206 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 INTS13Q9NVM9 706 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 A6NNZ2 444 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 TUBB8Q3ZCM7 444 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 ILDR1Q86SU0 546 aaPredicted RBP12.81□□□□□ -0.36
U2AF1-209ENST00000475639 ARHGAP24Q8N264 748 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 CDC23Q9UJX2 597 aa12.81□□□□□ -0.36
U2AF1-209ENST00000475639 SMIM23A6NLE4 172 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 SHOX2O60902 331 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 TXNDC2Q86VQ3 553 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 GABPB2Q8TAK5 448 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 CSRNP2Q9H175 543 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 ATP5DP30049 168 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 IGSF22Q8N9C0 903 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 NPATQ14207 1427 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 STX10O60499 249 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 GAS8O95995 478 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 HLA-DOAP06340 250 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 VIMP08670 466 aaKnown RBP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC50Q8IVM0 306 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 KCNG4Q8TDN1 519 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 HAUS7Q99871 368 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 MTX1Q13505 466 aa12.8□□□□□ -0.36
U2AF1-209ENST00000475639 RIN2Q8WYP3 895 aaPredicted RBP12.8□□□□□ -0.36
U2AF1-209ENST00000475639 A0A0U1RQJ8 604 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ZPR1O75312 459 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ADALQ6DHV7 355 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 TC2NQ8N9U0 490 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ELF1P32519 619 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ADKP55263 362 aaKnown RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 MTF1Q14872 753 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 GNAQP50148 359 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 PPP1R7Q15435 360 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 SH2D4BQ5SQS7 431 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 CEP128Q6ZU80 1094 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 NME9Q86XW9 330 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 TACO1Q9BSH4 297 aaKnown RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 EHD4Q9H223 541 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 WDR46O15213 610 aaKnown RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 INPP5BP32019 993 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 STAT6P42226 847 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 DDR1Q08345 913 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 IFT81Q8WYA0 676 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 CCDC8Q9H0W5 538 aaPredicted RBP12.79□□□□□ -0.36
U2AF1-209ENST00000475639 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
U2AF1-209ENST00000475639 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 CRCPO75575 148 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 PRR16Q569H4 304 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 MCUR1Q96AQ8 359 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 SLC26A6Q9BXS9 759 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 MCM8Q9UJA3 840 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 A0A0D9SFI3 127 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 CA8P35219 290 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 PDE1CQ14123 709 aaPredicted RBP12.78□□□□□ -0.36
U2AF1-209ENST00000475639 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 TMTC2Q8N394 836 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 NCOA7Q8NI08 942 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 TBC1D31Q96DN5 1066 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 CABS1Q96KC9 395 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 CD248Q9HCU0 757 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 MYO1FO00160 1098 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 IRF6O14896 467 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 ASIC1P78348 528 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 TAF12Q16514 161 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 RABEP2Q9H5N1 569 aa12.78□□□□□ -0.36
U2AF1-209ENST00000475639 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms