RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
APTX-219ENST00000474658 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
APTX-219ENST00000474658 R3HDMLQ9H3Y0 253 aa11.32□□□□□ -0.6
APTX-219ENST00000474658 MYH8P13535 1937 aa11.32□□□□□ -0.6
APTX-219ENST00000474658 PDHXO00330 501 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 SLC3A2P08195 630 aaKnown RBP11.31□□□□□ -0.6
APTX-219ENST00000474658 HMGCS2P54868 508 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 BACE1P56817 501 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 MTMR2Q13614 643 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
APTX-219ENST00000474658 ANKRD23Q86SG2 305 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 ZNF444Q8N0Y2 327 aaPredicted RBP11.31□□□□□ -0.6
APTX-219ENST00000474658 ACER1Q8TDN7 264 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 ZMYM6O95789 1325 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 RAD50Q92878 1312 aa11.31□□□□□ -0.6
APTX-219ENST00000474658 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 SGSM2O43147 1006 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 HAND2P61296 217 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 PDE4BQ07343 736 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 CRHR2Q13324 411 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
APTX-219ENST00000474658 ZYXQ15942 572 aaKnown RBP11.3□□□□□ -0.6
APTX-219ENST00000474658 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 CLEC10AQ8IUN9 316 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 PROCA1Q8NCQ7 364 aaPredicted RBP11.3□□□□□ -0.6
APTX-219ENST00000474658 DSCC1Q9BVC3 393 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.3□□□□□ -0.6
APTX-219ENST00000474658 ZNF287Q9HBT7 754 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
APTX-219ENST00000474658 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 PTPRFP10586 1907 aa11.3□□□□□ -0.6
APTX-219ENST00000474658 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 ZNF213O14771 459 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 TFAP4Q01664 338 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 PTH1RQ03431 593 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 PRDM10Q9NQV6 1147 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 AGTPBP1Q9UPW5 1226 aa11.29□□□□□ -0.6
APTX-219ENST00000474658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
APTX-219ENST00000474658 GPR25O00155 361 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 FGRP09769 529 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 CYP2C8P10632 490 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
APTX-219ENST00000474658 USP14P54578 494 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 ICA1Q05084 483 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 FEZ1Q99689 392 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 ESYT1Q9BSJ8 1104 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 NBPF3Q9H094 633 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 KANSL2Q9H9L4 492 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
APTX-219ENST00000474658 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.6
APTX-219ENST00000474658 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 RANBP6O60518 1105 aaKnown RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 TLR2O60603 784 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 CDC45O75419 566 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 TSPY3P0CV98 308 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 TSPY8P0CW00 308 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 NOM1Q5C9Z4 860 aaKnown RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 RRP12Q5JTH9 1297 aaKnown RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 ZNF296Q8WUU4 475 aaPredicted RBP11.27□□□□□ -0.61
APTX-219ENST00000474658 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
APTX-219ENST00000474658 TSPY2A6NKD2 308 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 ORC4O43929 436 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 FKTNO75072 461 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 OSBPP22059 807 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
APTX-219ENST00000474658 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
APTX-219ENST00000474658 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 MAP4K1Q92918 833 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 CEP95Q96GE4 821 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
APTX-219ENST00000474658 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
APTX-219ENST00000474658 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms