RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 POLA2Q14181 598 aa15.48■□□□□ 0.07
TRAF4-209ENST00000473421 NOL10Q9BSC4 688 aaKnown RBP15.48■□□□□ 0.07
TRAF4-209ENST00000473421 ANTXR1Q9H6X2 564 aa15.48■□□□□ 0.07
TRAF4-209ENST00000473421 C1orf115Q9H7X2 142 aa15.48■□□□□ 0.07
TRAF4-209ENST00000473421 DBNLQ9UJU6 430 aaKnown RBP15.48■□□□□ 0.07
TRAF4-209ENST00000473421 CDH23Q9H251 3354 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 MYH1P12882 1939 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 PLCG2P16885 1265 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 CYP7A1P22680 504 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 PTPREP23469 700 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 WDR78Q5VTH9 848 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 ANO1Q5XXA6 986 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 TATDN1Q6P1N9 297 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 CATSPERGQ6ZRH7 1159 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 CCAR1Q8IX12 1150 aaKnown RBP15.47■□□□□ 0.07
TRAF4-209ENST00000473421 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-209ENST00000473421 C12orf42Q96LP6 360 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 CCDC8Q9H0W5 538 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-209ENST00000473421 RABGAP1Q9Y3P9 1069 aa15.47■□□□□ 0.07
TRAF4-209ENST00000473421 VCAM1P19320 739 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 PLCD1P51178 756 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 KIAA1755Q5JYT7 1200 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 C9orf50Q5SZB4 431 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAF4-209ENST00000473421 TRMT44Q8IYL2 757 aaKnown RBP15.46■□□□□ 0.07
TRAF4-209ENST00000473421 TMEM57Q8N5G2 664 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.07
TRAF4-209ENST00000473421 DDX20Q9UHI6 824 aaKnown RBP15.46■□□□□ 0.07
TRAF4-209ENST00000473421 LTBP2Q14767 1821 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 A0A1W2PRG0 241 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SLC15A5A6NIM6 579 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L15C9J2P7 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L13C9JLJ4 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L11C9JVI0 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L18D6R9N7 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L22D6RA61 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L17D6RBQ6 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L19D6RCP7 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L20D6RJB6 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 CNGA1P29973 690 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SHMT1P34896 483 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 RTP1P59025 263 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 USP17L24Q0WX57 530 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 RAB3GAP1Q15042 981 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SHHQ15465 462 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 GJC2Q5T442 439 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-209ENST00000473421 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 EAF2Q96CJ1 260 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-209ENST00000473421 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 GINM1Q9NU53 330 aa15.45■□□□□ 0.06
TRAF4-209ENST00000473421 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
TRAF4-209ENST00000473421 IDH1O75874 414 aaKnown RBP15.44■□□□□ 0.06
TRAF4-209ENST00000473421 HLA-DOAP06340 250 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 GRB14Q14449 540 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 CCDC158Q5M9N0 1113 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 PRAMEF19Q5SWL8 479 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 MFSD14CQ5VZR4 134 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 SH3RF1Q7Z6J0 888 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 MAGEB6Q8N7X4 407 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 FEZ1Q99689 392 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 KIAA1683Q9H0B3 1180 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 RLFQ13129 1914 aa15.44■□□□□ 0.06
TRAF4-209ENST00000473421 SMIM22K7EJ46 135 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 COBLO75128 1261 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 HOXC6P09630 235 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 CYBAP13498 195 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 ATP8B2P98198 1209 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 SEPT2Q15019 361 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-209ENST00000473421 LPAR1Q92633 364 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 ZNF512BQ96KM6 892 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-209ENST00000473421 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-209ENST00000473421 SERPINB13Q9UIV8 391 aa15.43■□□□□ 0.06
TRAF4-209ENST00000473421 SPTBN5Q9NRC6 3674 aaKnown RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 ABCB5Q2M3G0 1257 aa15.42■□□□□ 0.06
TRAF4-209ENST00000473421 CERKLQ49MI3 558 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 LBX2Q6XYB7 198 aa15.42■□□□□ 0.06
TRAF4-209ENST00000473421 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 CDX2Q99626 313 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 MOV10L1Q9BXT6 1211 aaKnown RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
TRAF4-209ENST00000473421 ATP11BQ9Y2G3 1177 aa15.42■□□□□ 0.06
TRAF4-209ENST00000473421 TRIM43BA6NCK2 446 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 DNM1LO00429 736 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 ITGB8P26012 769 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 USP5P45974 858 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 OS9Q13438 667 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-209ENST00000473421 SLC39A5Q6ZMH5 540 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 CLEC10AQ8IUN9 316 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 BADQ92934 168 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 TRIM43Q96BQ3 446 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-209ENST00000473421 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-209ENST00000473421 RIOK1Q9BRS2 568 aaKnown RBP15.41■□□□□ 0.06
TRAF4-209ENST00000473421 EHD4Q9H223 541 aa15.41■□□□□ 0.06
TRAF4-209ENST00000473421 TTYH1Q9H313 450 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-209ENST00000473421 CYP2D6P10635 497 aa15.4■□□□□ 0.06
TRAF4-209ENST00000473421 RLBP1P12271 317 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms