RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 KIF23Q02241 960 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 EVX2Q03828 476 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 SEPT2Q15019 361 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 SH3D19Q5HYK7 790 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 RALYLQ86SE5 291 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 TBC1D10CQ8IV04 446 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 USP26Q9BXU7 913 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 NBPF3Q9H094 633 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 TOMM22Q9NS69 142 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 SLC45A1Q9Y2W3 748 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 A0A0G2JLL6 359 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 SMIM22K7EJ46 135 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 SLC27A2O14975 620 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 CA12O43570 354 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 PRDM1O75626 825 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 TTLL1O95922 423 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 GUCY1A2P33402 732 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 NOVP48745 357 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 JAG1P78504 1218 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 HTRA3P83110 453 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 ICA1Q05084 483 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 PABPC4Q13310 644 aaKnown RBP eCLIP14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 USP17L2Q6R6M4 530 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 PRRT2Q7Z6L0 340 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 DGKHQ86XP1 1220 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 LPAR1Q92633 364 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 MTMR4Q9NYA4 1195 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 TMX2Q9Y320 296 aa14.9□□□□□ -0.02
SPTLC1-204ENST00000469778 LAMB1P07942 1786 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 E7EWF7 191 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 GJA5P36382 358 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 SART3Q15020 963 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 RRP12Q5JTH9 1297 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 STK11IPQ8N1F8 1099 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 JMYQ8N9B5 988 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 IL27Q8NEV9 243 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 C12orf42Q96LP6 360 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 ZSWIM5Q9P217 1185 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
SPTLC1-204ENST00000469778 CCL15-CCL14A0A0B4J2E2 113 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 TRIM75PA6NK02 468 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 KDM4AO75164 1064 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 EEF2P13639 858 aaKnown RBP14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 PSMA5P28066 241 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 ANAPC15P60006 121 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 GRM1Q13255 1194 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 CCL15Q16663 113 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 ANKRD23Q86SG2 305 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 TMTC2Q8N394 836 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 FEZ1Q99689 392 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 UBAC1Q9BSL1 405 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 BEGAINQ9BUH8 593 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 GOPCQ9HD26 462 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
SPTLC1-204ENST00000469778 ERICH2A1L162 156 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 MCM5P33992 734 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 C8orf34Q49A92 452 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 FAM47AQ5JRC9 791 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 CEP95Q96GE4 821 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 CFHR5Q9BXR6 569 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 UPF2Q9HAU5 1272 aaKnown RBP14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 INCENPQ9NQS7 918 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 CLIP2Q9UDT6 1046 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 OTOFQ9HC10 1997 aa14.87□□□□□ -0.03
SPTLC1-204ENST00000469778 B4E1Z4 1266 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 AOC2O75106 756 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 TOP1P11387 765 aaKnown RBP14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 MTMR2Q13614 643 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 RCSD1Q6JBY9 416 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 IFNL1Q8IU54 200 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 TMEM87BQ96K49 555 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 NEK1Q96PY6 1258 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 ZSCAN10Q96SZ4 725 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 TM6SF1Q9BZW5 370 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 IL17RBQ9NRM6 502 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 PNMA3Q9UL41 463 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 STX8Q9UNK0 236 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 TACC3Q9Y6A5 838 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 NEDD4P46934 1319 aa14.86□□□□□ -0.03
SPTLC1-204ENST00000469778 LAMA4Q16363 1823 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 HMGCS2P54868 508 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 MKRN3Q13064 507 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 MOGSQ13724 837 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 DHX32Q7L7V1 743 aaKnown RBP14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
SPTLC1-204ENST00000469778 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms