RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SLFN12Q8IYM2 578 aa6.42□□□□□ -1.38
SMC4-208ENST00000467468 FBXO27Q8NI29 283 aa6.42□□□□□ -1.38
SMC4-208ENST00000467468 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
SMC4-208ENST00000467468 PAK6Q9NQU5 681 aaPredicted RBP6.42□□□□□ -1.38
SMC4-208ENST00000467468 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
SMC4-208ENST00000467468 TNNI2P48788 182 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 PLCL1Q15111 1095 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 SPACA3Q8IXA5 215 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 NKD1Q969G9 470 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 NT5C1AQ9BXI3 368 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 BRMS1Q9HCU9 246 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 PLAGL2Q9UPG8 496 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 U3KQE9 123 aa6.41□□□□□ -1.38
SMC4-208ENST00000467468 CBX7O95931 251 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 ZNF165P49910 485 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 NKPD1Q17RQ9 610 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 SEZ6Q53EL9 994 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 CDH24Q86UP0 819 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 PHACTR4Q8IZ21 702 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 ABI1Q8IZP0 508 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 REXO1Q8N1G1 1221 aaKnown RBP6.4□□□□□ -1.38
SMC4-208ENST00000467468 PIWIL2Q8TC59 973 aaKnown RBP6.4□□□□□ -1.38
SMC4-208ENST00000467468 UBP1Q9NZI7 540 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 CEP131Q9UPN4 1083 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 PCDHB14Q9Y5E9 798 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 CAPN6Q9Y6Q1 641 aa6.4□□□□□ -1.38
SMC4-208ENST00000467468 UPK3BL1B0FP48 263 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 UPK3BL2E5RIL1 263 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 ATE1O95260 518 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 MCM4P33991 863 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 BNIP3Q12983 259 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 IKZF1Q13422 519 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 ZNF574Q6ZN55 896 aaPredicted RBP6.39□□□□□ -1.39
SMC4-208ENST00000467468 THAP5Q7Z6K1 395 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 SLC43A3Q8NBI5 491 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 DNAJB8Q8NHS0 232 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 RIN3Q8TB24 985 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 CCDC74BQ96LY2 380 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 CCSER2Q9H7U1 834 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 GMIPQ9P107 970 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 KCNH3Q9ULD8 1083 aa6.39□□□□□ -1.39
SMC4-208ENST00000467468 CD8BP10966 210 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 RAG1P15918 1043 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 FUT4P22083 530 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 CRKP46108 304 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 LRRFIP1Q32MZ4 808 aaKnown RBP6.38□□□□□ -1.39
SMC4-208ENST00000467468 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 CDKAL1Q5VV42 579 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 NFXL1Q6ZNB6 911 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 SPRED2Q7Z698 418 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 RNF141Q8WVD5 230 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 EHMT1Q9H9B1 1298 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 PITPNM2Q9BZ72 1349 aa6.38□□□□□ -1.39
SMC4-208ENST00000467468 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 CHURC1-FNTBB4DL54 471 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 IMPDH2P12268 514 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 GBP1P32455 592 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 MCTP1Q6DN14 999 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 GK5Q6ZS86 529 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 SLITRK4Q8IW52 837 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 PI4K2BQ8TCG2 481 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 SPATA32Q96LK8 384 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 HSPA12BQ96MM6 686 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 ASPNQ9BXN1 380 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
SMC4-208ENST00000467468 ADGRE2Q9UHX3 823 aa6.37□□□□□ -1.39
SMC4-208ENST00000467468 H3BS24 57 aa6.36□□□□□ -1.39
SMC4-208ENST00000467468 RNF4P78317 190 aa6.36□□□□□ -1.39
SMC4-208ENST00000467468 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
SMC4-208ENST00000467468 PPP1R13LQ8WUF5 828 aa6.36□□□□□ -1.39
SMC4-208ENST00000467468 EAF1Q96JC9 268 aaPredicted RBP6.36□□□□□ -1.39
SMC4-208ENST00000467468 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
SMC4-208ENST00000467468 DDX41Q9UJV9 622 aaKnown RBP6.36□□□□□ -1.39
SMC4-208ENST00000467468 COL17A1Q9UMD9 1497 aaPredicted RBP6.35□□□□□ -1.39
SMC4-208ENST00000467468 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 BIN1O00499 593 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 RGS13O14921 159 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 TNK2Q07912 1038 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 ZNF792Q3KQV3 632 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 OVOS1Q6IE37 1185 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 SLC23A3Q6PIS1 610 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 NLRC3Q7RTR2 1065 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 WFDC3Q8IUB2 231 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 FAM177A1Q8N128 213 aaPredicted RBP6.35□□□□□ -1.39
SMC4-208ENST00000467468 BAHD1Q8TBE0 780 aaPredicted RBP6.35□□□□□ -1.39
SMC4-208ENST00000467468 KIF2CQ99661 725 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 TANGO6Q9C0B7 1094 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.35□□□□□ -1.397e-12■■■■■ 38.5
SMC4-208ENST00000467468 ACBD3Q9H3P7 528 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 CAPN10Q9HC96 672 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 GPATCH2Q9NW75 528 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 LMCD1Q9NZU5 365 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.35□□□□□ -1.39
SMC4-208ENST00000467468 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
SMC4-208ENST00000467468 CNTNAP4Q9C0A0 1308 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 DNAJA2O60884 412 aa6.34□□□□□ -1.39
SMC4-208ENST00000467468 CD96P40200 585 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms